Evidence map›Paper›PMID 26442052›Full record

ArticleFrontiers in plant science2015

Global analysis of lysine acetylation in strawberry leaves.

Xianping Fang, Wenyue Chen, Yun Zhao, Songlin Ruan, Hengmu Zhang, Chengqi Yan, Liang Jin, Lingling Cao, Jun Zhu, Huasheng Ma and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 77 citations in OpenAlex.

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  19. Phytoplasma-induced Changes in the Acetylome and Succinylome ofMolecular & cellular proteomics : MCP · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Xianping FangInstitute of Biology, Hangzhou Academy of Agricultural Sciences Hangzhou, China.
Wenyue ChenInstitute of Biology, Hangzhou Academy of Agricultural Sciences Hangzhou, China.
Yun ZhaoExperiment Center, Hangzhou Academy of Agricultural Sciences Hangzhou, China.
Songlin RuanInstitute of Biology, Hangzhou Academy of Agricultural Sciences Hangzhou, China.
Hengmu ZhangInstitute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences Hangzhou, China.
Chengqi YanInstitute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences Hangzhou, China.
Liang JinResearch and Development Center of Flower, Zhejiang Academy of Agricultural Sciences Hangzhou, China.
Lingling CaoJingjie PTM Biolabs Hangzhou, China.
Jun ZhuJingjie PTM Biolabs Hangzhou, China.
Huasheng MaInstitute of Biology, Hangzhou Academy of Agricultural Sciences Hangzhou, China.
Zhongyi ChengInstitute for Advanced Study of Translational Medicine, Tongji University Shanghai, China.
Tongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein lysine acetylation is a reversible and dynamic post-translational modification. It plays an important role in regulating diverse cellular processes including chromatin dynamic, metabolic pathways, and transcription in both prokaryotes and eukaryotes. Although studies of lysine acetylome in plants have been reported, the throughput was not high enough, hindering the deep understanding of lysine acetylation in plant physiology and pathology. In this study, taking advantages of anti-acetyllysine-based enrichment and high-sensitive-mass spectrometer, we applied an integrated proteomic approach to comprehensively investigate lysine acetylome in strawberry. In total, we identified 1392 acetylation sites in 684 proteins, representing the largest dataset of acetylome in plants to date. To reveal the functional impacts of lysine acetylation in strawberry, intensive bioinformatic analysis was performed. The results significantly expanded our current understanding of plant acetylome and demonstrated that lysine acetylation is involved in multiple cellular metabolism and cellular processes. More interestingly, nearly 50% of all acetylated proteins identified in this work were localized in chloroplast and the vital role of lysine acetylation in photosynthesis was also revealed. Taken together, this study not only established the most extensive lysine acetylome in plants to date, but also systematically suggests the significant and unique roles of lysine acetylation in plants.

Indexed as

acetylomebioinformaticslysine acetylationphotosynthesisproteomicsstrawberry

Identifiers

PMID26442052
PMCPMC4569977
OpenAlexW1803933266

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.