ArticleFrontiers in plant science2015
NAC transcription factor family genes are differentially expressed in rice during infections with Rice dwarf virus, Rice black-streaked dwarf virus, Rice grassy stunt virus, Rice ragged stunt virus, and Rice transitory yellowing virus.
Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed, 50 citations in OpenAlex.
- Article
- RT-RPA-PfAgo System: A Rapid, Sensitive, and Specific Multiplex Detection Method for Rice-Infecting Viruses.Biosensors · 2023Article
- Investigation of the Relationship between Genetic and Breeding Characteristics of WBPH Behavior according to Resistant Materials in Rice.Plants (Basel, Switzerland) · 2023Article
- The Role of Plant Transcription Factors in the Fight against Plant Viruses.International journal of molecular sciences · 2023Review
- Transcription Factor ZmNAC20 Improves Drought Resistance by Promoting Stomatal Closure and Activating Expression of Stress-Responsive Genes in Maize.International journal of molecular sciences · 2023Article
- Genome and Transcriptome-Wide Analysis ofInternational journal of molecular sciences · 2022Article
- Transcriptome sequencing and differential expression analysis of natural and BTH-treated wound healing in potato tubers (Solanum tuberosum L.).BMC genomics · 2022Article
- Article
- Cytochrome P450 MonooxygenasesViruses · 2021Article
- The NAC side of the fruit: tuning of fruit development and maturation.BMC plant biology · 2021Review
- Degradome Analysis of Tomato andInternational journal of molecular sciences · 2021Article
- NAC Candidate Gene Marker forFrontiers in plant science · 2021Article
- Article
- Effects of graphene on morphology, microstructure and transcriptomic profiling of Pinus tabuliformis Carr. roots.PloS one · 2021Article
- Symptoms and yield loss caused by rice stripe mosaic virus.Virology journal · 2019Article
- The NAC Protein fromPlants (Basel, Switzerland) · 2019Article
- Rice NAC transcription factor ONAC066 functions as a positive regulator of drought and oxidative stress response.BMC plant biology · 2019Article
- RNA-Seq analysis of gene expression changes triggered by Xanthomonas oryzae pv. oryzae in a susceptible rice genotype.Rice (New York, N.Y.) · 2019Article
- Comparative proteomic analysis of maize (Zea mays L.) seedlings under rice black-streaked dwarf virus infection.BMC plant biology · 2018Article
- RNA-Seq transcriptome analysis of Amaranthus palmeri with differential tolerance to glufosinate herbicide.PloS one · 2018Article
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Authors and funding
12 authors at 4 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Expression levels of the NAC gene family were studied in rice infected with Rice dwarf virus (RDV), Rice black-streaked dwarf virus (RBSDV), Rice grassy stunt virus (RGSV), Rice ragged stunt virus (RRSV), and Rice transitory yellowing virus (RTYV). Microarray analysis showed that 75 (68%) OsNAC genes were differentially regulated during infection with RDV, RBSDV, RGSV, and RRSV compared with the control. The number of OsNAC genes up-regulated was highest during RGSV infection, while the lowest number was found during RTYV infection. These phenomena correlate with the severity of the syndromes induced by the virus infections. Most of the genes in the NAC subgroups NAC22, SND, ONAC2, ANAC34, and ONAC3 were down-regulated for all virus infections. These OsNAC genes might be related to the health stage maintenance of the host plants. Interestingly, most of the genes in the subgroups TIP and SNAC were more highly expressed during RBSDV and RGSV infections. These results suggested that OsNAC genes might be related to the responses induced by the virus infection. All of the genes assigned to the TIP subgroups were highly expressed during RGSV infection when compared with the control. For RDV infection, the number of activated genes was greatest during infection with the S-strain, followed by the D84-strain and the O-strain, with seven OsNAC genes up-regulated during infection by all three strains. The Os12g03050 and Os11g05614 genes showed higher expression during infection with four of the five viruses, and Os11g03310, Os11g03370, and Os07g37920 genes showed high expression during at least three viral infections. We identified some duplicate genes that are classified as neofunctional and subfunctional according to their expression levels in different viral infections. A number of putative cis-elements were identified, which may help to clarify the function of these key genes in network pathways.
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