Evidence map›Paper›PMID 26441919›Full record

ArticleFrontiers in microbiology2015

The novel cis-encoded antisense RNA AsrC positively regulates the expression of rpoE-rseABC operon and thus enhances the motility of Salmonella enterica serovar typhi.

Qi Zhang, Ying Zhang, Xiaolei Zhang, Lifang Zhan, Xin Zhao, Shungao Xu, Xiumei Sheng, Xinxiang Huang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Small RNAs beyond Model Organisms: Have We Only Scratched the Surface?International journal of molecular sciences · 2022
    Article
  3. Relation of theInternational journal of molecular sciences · 2019
    Article
  4. Identification and Characterization of aFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Qi ZhangDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China ; Danyang People's Hospital of Jiangsu Province Danyang, China.
Ying ZhangDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Xiaolei ZhangDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Lifang ZhanDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Xin ZhaoDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Shungao XuDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Xiumei ShengDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Xinxiang HuangDepartment of Biochemistry and Molecular Biology, Jiangsu University - School of Medicine Zhenjiang, China.
Jiangsu University · CNFuyang City People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial non-coding RNAs are essential in many cellular processes, including response to environmental stress, and virulence. Deep sequencing analysis of the Salmonella enterica serovar typhi (S. typhi) transcriptome revealed a novel antisense RNA transcribed in cis on the strand complementary to rseC, an activator gene of sigma factor RpoE. In this study, expression of this antisense RNA was confirmed in S. typhi by Northern hybridization. Rapid amplification of cDNA ends and sequence analysis identified an 893 bp sequence from the antisense RNA coding region that covered all of the rseC coding region in the reverse direction of transcription. This sequence of RNA was named as AsrC. After overexpression of AsrC with recombinantant plasmid in S. typhi, the bacterial motility was increased obviously. To explore the mechanism of AsrC function, regulation of rseC and rpoE expression by AsrC was investigated. We found that AsrC increased the levels of rseC mRNA and protein. The expression of rpoE was also increased in S. typhi after overexpression of AsrC, which was dependent on rseC. Thus, we propose that AsrC increased RseC level and indirectly activating RpoE which can initiate fliA expression and promote the motility of S. typhi.

Indexed as

antisense RNAAsrCinvasionrpoErseCSalmonella enterica serovar typhi

Identifiers

PMID26441919
PMCPMC4585123
OpenAlexW2100424673

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.