Evidence map›Paper›PMID 26441853›Full record

ArticleFrontiers in microbiology2015

Filamentous fungi from extreme environments as a promising source of novel bioactive secondary metabolites.

Renato Chávez, Francisco Fierro, Ramón O García-Rico, Inmaculada Vaca

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
7.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 105 citations in OpenAlex.

  1. Review
  2. Article
  3. Bio-guided discovery of antibacterial metabolites fromJournal of enzyme inhibition and medicinal chemistry · 2025
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  6. Article
  7. Review
  8. Review
  9. Article
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  11. Review
  12. Metabolic Potential of Halophilic Filamentous Fungi-Current Perspective.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Review
  20. Frontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 3 countries.

Renato ChávezFacultad de Química y Biología, Departamento de Biología, Universidad de Santiago de Chile Santiago, Chile.
Francisco FierroDivisión de Ciencias Biológicas y de la Salud, Departamento de Biotecnología, Universidad Autónoma Metropolitana-Unidad Iztapalapa México D.F., Mexico.
Ramón O García-RicoGrupo GIMBIO, Facultad de Ciencias Básicas, Departamento de Microbiología, Universidad de Pamplona Pamplona, Colombia.
Inmaculada VacaFacultad de Ciencias, Departamento de Química, Universidad de Chile Santiago, Chile.
Universidad Autónoma Metropolitana · MXUniversidad de Santiago de Chile · CLUniversity of Chile · CLUniversity of Pamplona · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural product search is undergoing resurgence upon the discovery of a huge previously unknown potential for secondary metabolite (SM) production hidden in microbial genomes. This is also the case for filamentous fungi, since their genomes contain a high number of "orphan" SM gene clusters. Recent estimates indicate that only 5% of existing fungal species have been described, thus the potential for the discovery of novel metabolites in fungi is huge. In this context, fungi thriving in harsh environments are of particular interest since they are outstanding producers of unusual chemical structures. At present, there are around 16 genomes from extreme environment-isolated fungi in databases. In a preliminary analysis of three of these genomes we found that several of the predicted SM gene clusters are probably involved in the biosynthesis of compounds not yet described. Genome mining strategies allow the exploitation of the information in genome sequences for the discovery of new natural compounds. The synergy between genome mining strategies and the expected abundance of SMs in fungi from extreme environments is a promising path to discover new natural compounds as a source of medically useful drugs.

Indexed as

extreme environmentsfilamentous fungigenome miningmetagenomicsnatural productssecondary metabolites

Identifiers

PMID26441853
PMCPMC4563253
OpenAlexW1867746714

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.