Evidence map›Paper›PMID 26441852›Full record

ArticleFrontiers in microbiology2015

Bacterial diversity and successional patterns during biofilm formation on freshly exposed basalt surfaces at diffuse-flow deep-sea vents.

Lara K Gulmann, Stace E Beaulieu, Timothy M Shank, Kang Ding, William E Seyfried, Stefan M Sievert

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  6. Article
  7. Review
  8. Multispecies Populations of MethanotrophicApplied and environmental microbiology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Ecological Succession of Sulfur-OxidizingFrontiers in microbiology · 2018
    Article
  17. Article
  18. Comparative Genomic Analysis of the ClassFrontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lara K GulmannBiology Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA.
Stace E BeaulieuBiology Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA.
Timothy M ShankBiology Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA.
Kang DingDepartment of Earth Sciences, University of Minnesota, Minneapolis MN, USA.
William E SeyfriedDepartment of Earth Sciences, University of Minnesota, Minneapolis MN, USA.
Stefan M SievertBiology Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many deep-sea hydrothermal vent systems are regularly impacted by volcanic eruptions, leaving fresh basalt where abundant animal and microbial communities once thrived. After an eruption, microbial biofilms are often the first visible evidence of biotic re-colonization. The present study is the first to investigate microbial colonization of newly exposed basalt surfaces in the context of vent fluid chemistry over an extended period of time (4-293 days) by deploying basalt blocks within an established diffuse-flow vent at the 9°50' N vent field on the East Pacific Rise. Additionally, samples obtained after a recent eruption at the same vent field allowed for comparison between experimental results and those from natural microbial re-colonization. Over 9 months, the community changed from being composed almost exclusively of Epsilonproteobacteria to a more diverse assemblage, corresponding with a potential expansion of metabolic capabilities. The process of biofilm formation appears to generate similar surface-associated communities within and across sites by selecting for a subset of fluid-associated microbes, via species sorting. Furthermore, the high incidence of shared operational taxonomic units over time and across different vent sites suggests that the microbial communities colonizing new surfaces at diffuse-flow vent sites might follow a predictable successional pattern.

Indexed as

16S rRNAcolonizationdisturbanceEpsilonproteobacteriahydrothermal ventssettlementspecies sortingvolcanic eruption

Identifiers

PMID26441852
PMCPMC4564720

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.