Evidence map›Paper›PMID 26439285›Full record

ArticleJournal of structural biology2015

Reassessment of MxiH subunit orientation and fold within native Shigella T3SS needles using surface labelling and solid-state NMR.

Joeri Verasdonck, Da-Kang Shen, Alexander Treadgold, Christopher Arthur, Anja Böckmann, Beat H Meier, Ariel J Blocker

Abstract read
In one paragraph

Article in Journal of structural biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Toward aInternational journal of molecular sciences · 2023
    Review
  2. Solid-State NMR Structure of Amyloid-β Fibrils.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. The T3SS ofMicroorganisms · 2020
    Review
  4. The type III secretion system needle, tip, and translocon.Protein science : a publication of the Protein Society · 2019
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Joeri VerasdonckPhysical Chemistry, ETH Zurich, 8093 Zurich, Switzerland.
Da-Kang ShenSchool of Cellular & Molecular Medicine, University of Bristol, BS8 1TD Bristol, United Kingdom.
Alexander TreadgoldSchool of Cellular & Molecular Medicine, University of Bristol, BS8 1TD Bristol, United Kingdom.
Christopher ArthurSchool of Chemistry, University of Bristol, BS8 1TS Bristol, United Kingdom.
Anja BöckmannInstitut de Biologie et Chimie des Protéines, Bases Moléculaires et Structurales des Systèmes Infectieux, Labex Ecofect, UMR 5086 CNRS, Université de Lyon, Lyon, France. Electronic address: a.bockmann@ibcp.fr.
Beat H MeierPhysical Chemistry, ETH Zurich, 8093 Zurich, Switzerland. Electronic address: beme@ethz.ch.
Ariel J BlockerSchools of Cellular & Molecular Medicine and Biochemistry, University of Bristol, BS8 1TD Bristol, United Kingdom. Electronic address: ariel.blocker@bristol.ac.uk.

Funding

Medical Research Council MR-J002097-1Medical Research Council MR/J002097/1Wellcome Trust 104634
6 · The paper itself

Abstract

T3SSs are essential virulence determinants of many Gram-negative bacteria, used to inject bacterial effectors of virulence into eukaryotic host cells. Their major extracellular portion, a ∼50 nm hollow, needle-like structure, is essential to host cell sensing and the conduit for effector secretion. It is formed of a small, conserved subunit arranged as a helical polymer. The structure of the subunit has been studied by electron cryomicroscopy within native polymers and by solid-state NMR in recombinant polymers, yielding two incompatible atomic models. To resolve this controversy, we re-examined the native polymer used for electron cryomicroscopy via surface labelling and solid-state NMR. Our data show the orientation and overall fold of the subunit within this polymer is as established by solid-state NMR for recombinant polymers.

Indexed as

Protein FoldingBacterial ProteinsCryoelectron MicroscopyModels, MolecularMutationNuclear Magnetic Resonance, BiomolecularProtein Structure, TertiaryShigella flexneriType III Secretion SystemsBacterial ProteinsMxiH protein, ShigellaType III Secretion SystemsNeedleShigellaSolid-state NMRSurface labellingType III secretion

Identifiers

PMID26439285
PMCPMC4658334

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.