Evidence map›Paper›PMID 26439281›Full record

ArticleThe journal of physical chemistry. B2016

Mechanism of C-Terminal Fragments of Amyloid β-Protein as Aβ Inhibitors: Do C-Terminal Interactions Play a Key Role in Their Inhibitory Activity?

Xueyun Zheng, Chun Wu, Deyu Liu, Huiyuan Li, Gal Bitan, Joan-Emma Shea, Michael T Bowers

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. AβACS chemical neuroscience · 2023
    Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Multicomponent peptide assemblies.Chemical Society reviews · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Conformational Ensembles of the Wild-Type and S8C Aβ1-42 Dimers.The journal of physical chemistry. B · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xueyun ZhengDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Chun WuDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Deyu LiuDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Huiyuan LiDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Gal BitanDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Joan-Emma SheaDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
Michael T BowersDepartment of Chemistry and Biochemistry and ∥Department of Physics, University of California , Santa Barbara, California 93106, United States.
University of California, Los Angeles · USUniversity of California, Santa Barbara · US

Funding

PROTEIN CHEMISTRY COREP01AG027818 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TEPLOW, DAVID B. · 2006 to 2010
$7.6M
Amyloid Beta-Protein: Wild Type and Familial Mutant Assembly and InhibitionR01AG047116 · NIA · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI BOWERS, MICHAEL THOMAS · 2013 to 2016
$1.8M
NIA NIH HHS AG047116NIA NIH HHS P01 AG027818NIA NIH HHS R01 AG047116
6 · The paper itself

Abstract

Targeting the early oligomerization of amyloid β protein (Aβ) is a promising therapeutic strategy for Alzheimer's disease (AD). Recently, certain C-terminal fragments (CTFs) derived from Aβ42 were shown to be potent inhibitors of Aβ-induced toxicity. The shortest peptide studied, Aβ(39-42), has been shown to modulate Aβ oligomerization and inhibit Aβ toxicity. Understanding the mechanism of these CTFs, especially Aβ(39-42), is of significance for future therapeutic development of AD and peptidomimetic-based drug development. Here we used ion mobility spectrometry-mass spectrometry to investigate the interactions between two modified Aβ(39-42) derivatives, VVIA-NH2 and Ac-VVIA, and full-length Aβ42. VVIA-NH2 was previously shown to inhibit Aβ toxicity, whereas Ac-VVIA did not. Our mass spectrometry analysis revealed that VVIA-NH2 binds directly to Aβ42 monomer and small oligomers while Ac-VVIA binds only to Aβ42 monomer. Ion mobility studies showed that VVIA-NH2 modulates Aβ42 oligomerization by not only inhibiting the dodecamer formation but also disaggregating preformed Aβ42 dodecamer. Ac-VVIA also inhibits and removes preformed Aβ42 dodecamer. However, the Aβ42 sample with the addition of Ac-VVIA clogged the nanospray tip easily, indicating that larger aggregates are formed in the solution in the presence of Ac-VVIA. Molecular dynamics simulations suggested that VVIA-NH2 binds specifically to the C-terminal region of Aβ42 while Ac-VVIA binds dispersedly to multiple regions of Aβ42. This work implies that C-terminal interactions and binding to Aβ oligomers are important for C-terminal fragment inhibitors.

Indexed as

Alzheimer DiseaseAmyloid beta-PeptidesDrug DiscoveryHumansMolecular Dynamics SimulationPeptide FragmentsPeptidomimeticsProtein Aggregatesamyloid beta-peptide (39-42)Amyloid beta-Peptidesamyloid beta-protein (1-42)Peptide FragmentsPeptidomimeticsProtein Aggregates

Identifiers

PMID26439281
PMCPMC4777659
OpenAlexW2296995867

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.