Evidence map›Paper›PMID 26438849›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Elevation of 20-carbon long chain bases due to a mutation in serine palmitoyltransferase small subunit b results in neurodegeneration.

Lihong Zhao, Stefka Spassieva, Kenneth Gable, Sita D Gupta, Lan-Ying Shi, Jieping Wang, Jacek Bielawski, Wanda L Hicks, Mark P Krebs, Juergen Naggert and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Human genetic defects of sphingolipid synthesis.Journal of inherited metabolic disease · 2025
    Review
  11. Review
  12. Recurrent de novoJournal of neurology, neurosurgery, and psychiatry · 2024
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Sphingolipids in neurodegenerative diseases.Frontiers in neuroscience · 2023
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Lihong ZhaoThe Jackson Laboratory, Bar Harbor, ME 04609; lihong.zhao@jax.org patsy.nishina@jax.org.
Stefka SpassievaDepartment of Medicine, Medical University of South Carolina, Charleston, SC 29425;
Kenneth GableDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814;
Sita D GuptaDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814;
Lan-Ying ShiThe Jackson Laboratory, Bar Harbor, ME 04609;
Jieping WangThe Jackson Laboratory, Bar Harbor, ME 04609;
Jacek BielawskiDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425;
Wanda L HicksThe Jackson Laboratory, Bar Harbor, ME 04609;
Mark P KrebsThe Jackson Laboratory, Bar Harbor, ME 04609;
Juergen NaggertThe Jackson Laboratory, Bar Harbor, ME 04609;
Yusuf A HannunStony Brook Cancer Center, Health Science Center, Stony Brook University, Stony Brook, NY 11794.
Teresa M DunnDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814;
Patsy M NishinaThe Jackson Laboratory, Bar Harbor, ME 04609; lihong.zhao@jax.org patsy.nishina@jax.org.
Jackson Laboratory · USUniformed Services University of the Health Sciences · USMedical University of South Carolina · USStony Brook University · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
High Throughput Production and Cryopreservation of Knockout MiceU42OD011185 · OD · JACKSON LABORATORY · PI MURRAY, STEPHEN A, TAFT, ROBERT A · 2012 to 2015
$17.9M
Mouse Models for Vision ResearchR01EY016501 · NEI · JACKSON LABORATORY · PI NISHINA, PATSY M · 2005 to 2014
$9.4M
Sphingomyelin Turnover and Cellular RegulationR37GM043825 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI HANNUN, YUSUF AWNI · 2007 to 2015
$3.7M
Sphingolipid Rheostat in NeurodegenerationR21NS075447 · NINDS · JACKSON LABORATORY · PI ZHAO, LIHONG · 2011 to 2012
$494k
ORM Protein Regulation of Sphingolipid Biosynthesis in Yeast and MammalsR21HD080181 · NICHD · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI DUNN, TERESA M · 2014 to 2015
$423k
NCI NIH HHS CA34196NCI NIH HHS P30 CA034196NEI NIH HHS EY016501NEI NIH HHS R01 EY016501NICHD NIH HHS HD080181NICHD NIH HHS R21 HD080181NIGMS NIH HHS R37 GM043825NIH HHS OD011185NIH HHS U42 OD011185NINDS NIH HHS NS075447NINDS NIH HHS R21 NS075447
6 · The paper itself

Abstract

Sphingolipids typically have an 18-carbon (C18) sphingoid long chain base (LCB) backbone. Although sphingolipids with LCBs of other chain lengths have been identified, the functional significance of these low-abundance sphingolipids is unknown. The LCB chain length is determined by serine palmitoyltransferase (SPT) isoenzymes, which are trimeric proteins composed of two large subunits (SPTLC1 and SPTLC2 or SPTLC3) and a small subunit (SPTssa or SPTssb). Here we report the identification of an Sptssb mutation, Stellar (Stl), which increased the SPT affinity toward the C18 fatty acyl-CoA substrate by twofold and significantly elevated 20-carbon (C20) LCB production in the mutant mouse brain and eye, resulting in surprising neurodegenerative effects including aberrant membrane structures, accumulation of ubiquitinated proteins on membranes, and axon degeneration. Our work demonstrates that SPT small subunits play a major role in controlling SPT activity and substrate affinity, and in specifying sphingolipid LCB chain length in vivo. Moreover, our studies also suggest that excessive C20 LCBs or C20 LCB-containing sphingolipids impair protein homeostasis and neural functions.

Indexed as

MutationAmino Acid SequenceAnimalsCarbonHumansMiceMolecular Sequence DataNeurodegenerative DiseasesSequence Homology, Amino AcidSerine C-PalmitoyltransferaseUbiquitinationCarbonSerine C-Palmitoyltransferaseaxon degenerationlong chain baseneurodegenerationserine palmitoyltransferasesphingolipid

Identifiers

PMID26438849
PMCPMC4620873
OpenAlexW1847352541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.