Evidence map›Paper›PMID 26438836›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Mutation of the ER retention receptor KDELR1 leads to cell-intrinsic lymphopenia and a failure to control chronic viral infection.

Owen M Siggs, Daniel L Popkin, Philippe Krebs, Xiaohong Li, Miao Tang, Xiaoming Zhan, Ming Zeng, Pei Lin, Yu Xia, Michael B A Oldstone and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. The Function of KDEL Receptors as UPR Genes in Disease.International journal of molecular sciences · 2021
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Owen M SiggsDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037; Medical Research Council Human Immunology Unit, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom; Bruce.Beutler@UTSouthwestern.edu owen.siggs@gmail.com.
Daniel L PopkinDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037;
Philippe KrebsDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037;
Xiaohong LiDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037; Center for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Miao TangCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Xiaoming ZhanCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Ming ZengCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Pei LinDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037;
Yu XiaDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037;
Michael B A OldstoneDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037;
Richard J CornallMedical Research Council Human Immunology Unit, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom;
Bruce BeutlerDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037; Center for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390 Bruce.Beutler@UTSouthwestern.edu owen.siggs@gmail.com.
Scripps Research Institute · USThe University of Texas Southwestern Medical Center · USUniversity of Oxford · GB

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2012 to 2021
$49.1M
PATHOGENESIS OF PERSISTENT VIRAL INFECTIONR01AI009484 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI OLDSTONE, MICHAEL B · 1985 to 2016
$7.2M
Medical Research Council MC_UU_12010/6NIAID NIH HHS R01 AI009484NIAID NIH HHS U19 AI100627NIAID NIH HHS U19AI100627Wellcome Trust 100083Wellcome Trust 100083/Z/12/Z
6 · The paper itself

Abstract

Endoplasmic reticulum (ER)-resident proteins are continually retrieved from the Golgi and returned to the ER by Lys-Asp-Glu-Leu (KDEL) receptors, which bind to an eponymous tetrapeptide motif at their substrate's C terminus. Mice and humans possess three paralogous KDEL receptors, but little is known about their functional redundancy, or if their mutation can be physiologically tolerated. Here, we present a recessive mouse missense allele of the prototypical mammalian KDEL receptor, KDEL ER protein retention receptor 1 (KDELR1). Kdelr1 homozygous mutants were mildly lymphopenic, as were mice with a CRISPR/Cas9-engineered frameshift allele. Lymphopenia was cell intrinsic and, in the case of T cells, was associated with reduced expression of the T-cell receptor (TCR) and increased expression of CD44, and could be partially corrected by an MHC class I-restricted TCR transgene. Antiviral immunity was also compromised, with Kdelr1 mutant mice unable to clear an otherwise self-limiting viral infection. These data reveal a nonredundant cellular function for KDELR1, upon which lymphocytes distinctly depend.

Indexed as

Genetic Predisposition to DiseaseMutationAnimalsChronic DiseaseEndoplasmic ReticulumFemaleLymphopeniaMaleMiceMice, Mutant StrainsReceptors, PeptideVirus DiseasesKDELR1 protein, humanReceptors, PeptidelymphocytesN-ethyl-N-nitrosoureapositive selectionT-cell developmentT-cell survival

Identifiers

PMID26438836
PMCPMC4620900
OpenAlexW2226336744

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.