Evidence map›Paper›PMID 26438724›Full record

ArticleThe EMBO journal2015

H3K9 methylation extends across natural boundaries of heterochromatin in the absence of an HP1 protein.

Rieka Stunnenberg, Raghavendran Kulasegaran-Shylini, Claudia Keller, Moritz A Kirschmann, Laurent Gelman, Marc Bühler

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

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  7. Topoisomerase VI participates in an insulator-like function that prevents H3K9me2 spreading.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  18. Phosphorylation of an HP1-like protein is a prerequisite for heterochromatin body formation in Tetrahymena DNA elimination.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rieka StunnenbergFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland University of Basel, Basel, Switzerland.
Raghavendran Kulasegaran-ShyliniFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Claudia KellerFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland University of Basel, Basel, Switzerland.
Moritz A KirschmannFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Laurent GelmanFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Marc BühlerFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland University of Basel, Basel, Switzerland marc.buehler@fmi.ch.
Friedrich Miescher Institute · CHUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins of the conserved HP1 family are elementary components of heterochromatin and are generally assumed to play a central role in the creation of a rigid, densely packed heterochromatic network that is inaccessible to the transcription machinery. Here, we demonstrate that the fission yeast HP1 protein Swi6 exists as a single highly dynamic population that rapidly exchanges in cis and in trans between different heterochromatic regions. Binding to methylated H3K9 or to heterochromatic RNA decelerates Swi6 mobility. We further show that Swi6 is largely dispensable to the maintenance of heterochromatin domains. In the absence of Swi6, H3K9 methylation levels are maintained by a mechanism that depends on polymeric self-association properties of Tas3, a subunit of the RNA-induced transcriptional silencing complex. Our results disclose a surprising role for Swi6 dimerization in demarcating constitutive heterochromatin from neighboring euchromatin. Thus, rather than promoting maintenance and spreading of heterochromatin, Swi6 appears to limit these processes and appropriately confine heterochromatin.

Indexed as

Carrier ProteinsChromosomal Proteins, Non-HistoneHeterochromatinHistonesMethylationProtein MultimerizationRNA, FungalSchizosaccharomycesSchizosaccharomyces pombe ProteinsCarrier ProteinsChromosomal Proteins, Non-HistoneHeterochromatinHistonesRNA, FungalSchizosaccharomyces pombe ProteinsSwi6 protein, S pombeTas3 protein, S pombeH3K9 methylationheterochromatinHP1 dynamicsSwi6Tas3

Identifiers

PMID26438724
PMCPMC4682641
OpenAlexW1849190809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.