Evidence map›Paper›PMID 26438164›Full record

ArticleFunctional & integrative genomics2016

A single gene all3940 (Dps) overexpression in Anabaena sp. PCC 7120 confers multiple abiotic stress tolerance via proteomic alterations.

Om Prakash Narayan, Nidhi Kumari, Poonam Bhargava, Hema Rajaram, Lal Chand Rai

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Article in Functional & integrative genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Om Prakash NarayanMolecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi, 221 005, India.
Nidhi KumariMolecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi, 221 005, India.
Poonam BhargavaGujarat State Biotechnology Mission, Department of Science and Technology, Government of Gujarat, GandhiNagar, Gujarat, India.
Hema RajaramMolecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400 085, India.
Lal Chand RaiMolecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi, 221 005, India. lcrbhu15@gmail.com.
Banaras Hindu University · INBhabha Atomic Research Centre · INGovernment of Gujarat · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA-binding proteins (Dps) induced during starvation play an important role in gene regulation and maintaining homeostasis in bacteria. The nitrogen-fixing cyanobacterium, Anabaena PCC7120, has four genes annotated as coding for Dps; however, the information on their physiological roles is limiting. One of the genes coding for Dps, 'all3940' was found to be induced under different abiotic stresses in Anabaena and upon overexpression enhanced the tolerance of Anabaena to a multitude of stresses, which included salinity, heat, heavy metals, pesticide, and nutrient starvation. On the other hand, mutation in the gene resulted in decreased growth of Anabaena. The modulation in the levels of All3940 in Anabaena, achieved either by overexpression of the protein or mutation of the gene, resulted in changes in the proteome, which correlated well with the physiological changes observed. Proteins required for varied physiological activities, such as photosynthesis, carbon-metabolism, oxidative stress alleviation, exhibited change in protein profile upon modulation of All3940 levels in Anabaena. This suggested a direct or an indirect effect of All3940 on the expression of the above stress-responsive proteins, thereby enhancing tolerance in Anabaena PCC7120. Thus, All3940, though categorized as a Dps, is possibly a general stress protein having a global role in regulating tolerance to multitude of stresses in Anabaena.

Indexed as

Gene Expression Regulation, PlantStress, PhysiologicalAnabaenaDNA-Binding ProteinsPlant ProteinsProteomeUp-RegulationDNA-Binding ProteinsPlant ProteinsProteomeAnabaenaGenetic engineeringMALDI-TOF/MSProteomics

Identifiers

PMID26438164
OpenAlexW2471747364

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.