Evidence map›Paper›PMID 26438149›Full record

ArticleBMC plant biology2015

Low temperature-induced DNA hypermethylation attenuates expression of RhAG, an AGAMOUS homolog, and increases petal number in rose (Rosa hybrida).

Nan Ma, Wen Chen, Tiangang Fan, Yaran Tian, Shuai Zhang, Daxing Zeng, Yonghong Li

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 74 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nan MaDepartment of Ornamental Horticulture, China Agricultural University, Beijing, 100193, China. ma_nan@cau.edu.cn.
Wen ChenThe Key Laboratory for Quality Improvement of Agricultural Products of Zhejiang Province, School of Agriculture and Food Science, Zhejiang Agriculture & Forestry University, Lin'an, 311300, China. askcw2005@163.com.
Tiangang FanSchool of Applied Chemistry and Biotechnology, Shenzhen Polytechnic, Shenzhen, Guangdong, 518055, China. fantiangang1988211@163.com.
Yaran TianSchool of Applied Chemistry and Biotechnology, Shenzhen Polytechnic, Shenzhen, Guangdong, 518055, China. 245824586@qq.com.
Shuai ZhangDepartment of Ornamental Horticulture, China Agricultural University, Beijing, 100193, China. 289614391@qq.com.
Daxing ZengSchool of Applied Chemistry and Biotechnology, Shenzhen Polytechnic, Shenzhen, Guangdong, 518055, China. zengdx@szpt.edu.cn.
Yonghong LiSchool of Applied Chemistry and Biotechnology, Shenzhen Polytechnic, Shenzhen, Guangdong, 518055, China. liyongh@szpt.edu.cn.
Shenzhen Polytechnic · CNChina Agricultural University · CNZhejiang A & F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFlower development is central to angiosperm reproduction and is regulated by a broad range of endogenous and exogenous stimuli. It has been well documented that ambient temperature plays a key role in controlling flowering time; however, the mechanisms by which temperature regulates floral organ differentiation remain largely unknown.

resultsIn this study, we show that low temperature treatment significantly increases petal number in rose (Rosa hybrida) through the promotion of stamen petaloidy. Quantitative RT-PCR analysis revealed that the expression pattern of RhAG, a rose homolog of the Arabidopsis thaliana AGAMOUS C-function gene, is associated with low temperature regulated flower development. Silencing of RhAG mimicked the impact of low temperature treatments on petal development by significantly increasing petal number through an increased production of petaloid stamens. In situ hybridization studies further revealed that low temperature restricts its spatial expression area. Analysis of DNA methylation level showed that low temperature treatment enhances the methylation level of the RhAG promoter, and a specific promoter region that was hypermethylated at CHH loci under low temperature conditions, was identified by bisulfite sequencing. This suggests that epigenetic DNA methylation contributes to the ambient temperature modulation of RhAG expression. DISCUSSION: Our results provide highlights in the role of RhAG gene in petal number determination and add a new layer of complexity in the regulation of floral organ development.

conclusionsWe propose that RhAG plays an essential role in rose flower patterning by regulating petal development, and that low temperatures increase petal number, at least in part, by suppressing RhAG expression via enhancing DNA CHH hypermethylation of the RhAG promoter.

Indexed as

Cold TemperatureGene Expression Regulation, PlantSequence Homology, Amino AcidDNA MethylationFlowersGene Expression Regulation, DevelopmentalGene SilencingGenes, PlantIn Situ HybridizationMolecular Sequence DataPhenotypePlant ProteinsPromoter Regions, GeneticRNA, MessengerRosaSequence Analysis, DNAPlant ProteinsRNA, Messenger

Identifiers

PMID26438149
PMCPMC4595006
OpenAlexW1820142494

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.