Evidence map›Paper›PMID 26437858›Full record

ArticleNature communications2015

Model of fibrolamellar hepatocellular carcinomas reveals striking enrichment in cancer stem cells.

Tsunekazu Oikawa, Eliane Wauthier, Timothy A Dinh, Sara R Selitsky, Andrea Reyna-Neyra, Guido Carpino, Ronald Levine, Vincenzo Cardinale, David Klimstra, Eugenio Gaudio and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
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  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. JHEP reports : innovation in hepatology · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. A framework for fibrolamellar carcinoma research and clinical trials.Nature reviews. Gastroenterology & hepatology · 2022
    Review
  19. Cellular origins of regenerating liver and hepatocellular carcinoma.JHEP reports : innovation in hepatology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Tsunekazu OikawaDepartment of Cell Biology and Physiology, Chapel Hill, North Carolina 27599, USA.
Eliane WauthierDepartment of Cell Biology and Physiology, Chapel Hill, North Carolina 27599, USA.
Timothy A DinhDepartment of Genetics, Chapel Hill, North Carolina 27599, USA.
Sara R SelitskyDepartment of Genetics, Chapel Hill, North Carolina 27599, USA.
Andrea Reyna-NeyraDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, 333 Cedar Street, New Haven, Connecticut 06510, USA.
Guido CarpinoDepartment of Movement, Human and Health Sciences, Division of Health Sciences, University of Rome 'Foro Italico', Piazza Lauro De Bosis 6, 00151 Rome, Italy.
Ronald LevineGreenwich Hospital, 5 Perryridge Road, Greenwich, Connecticut 06830, USA.
Vincenzo CardinaleDivision of Gastroenterology, Department of Scienze e Biotecnologie Medico-Chirurgiche, Fondazione Eleonora Lorillard Spencer Cenci, Polo Pontino, Viale dell'Universita 37, 00185 Rome, Italy.
David KlimstraDepartment of Pathology, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, New York, New York 10065, USA.
Eugenio GaudioDepartment of Anatomical, Histological, Forensic Medicine and Orthopedic Sciences, Sapienza University of Rome, Via Borelli 50, 00161 Rome, Italy.
Domenico AlvaroDivision of Gastroenterology, Department of Scienze e Biotecnologie Medico-Chirurgiche, Fondazione Eleonora Lorillard Spencer Cenci, Polo Pontino, Viale dell'Universita 37, 00185 Rome, Italy.
Nancy CarrascoDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, 333 Cedar Street, New Haven, Connecticut 06510, USA.
Praveen SethupathyLineberger Comprehensive Cancer Center, Chapel Hill, North Carolina 27599, USA.
Lola M ReidDepartment of Cell Biology and Physiology, Chapel Hill, North Carolina 27599, USA.
University of North Carolina at Chapel Hill · USYale University · USForo Italico University of Rome · ITGreenwich Hospital · USMemorial Sloan Kettering Cancer Center · USSapienza University of Rome · IT

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT S. SANDLER · 1985 to 2026
$30.5M
THYROID SODIUM I/ SYMPORTERR01DK041544 · NIDDK · YESHIVA UNIVERSITY · PI ABBOTT, GEOFFREY W, CARRASCO, NANCY · 1989 to 2017
$5.6M
Molecular Biology of Viral Diseases Predoctoral Training GrantT32AI007419 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Mark T Heise, CARY A MOODY · 1993 to 2026
$4.7M
UNC Predoc Training Progr in Bioinformatics/Comp BiologyT32GM067553 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELSTON, TIMOTHY C · 2005 to 2019
$2.5M
Discovery of microRNA regulatory modules controlling human pancreatic islet functR00DK091318 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SETHUPATHY, PRAVEEN · 2012 to 2014
$737k
Development of 3D organ-specific models of colorectal cancer metastasisR21CA182322 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WANG, ANDREW ZHUANG · 2013 to 2015
$644k
NCI NIH HHS 1R21CA182322-01NCI NIH HHS CA016086NCI NIH HHS P30 CA016086NCI NIH HHS R21 CA182322NIAID NIH HHS T31AI007419NIAID NIH HHS T32 AI007419NIDDK NIH HHS DK34987NIDDK NIH HHS P30 DK034987NIDDK NIH HHS P30DK34987NIDDK NIH HHS R00 DK091318NIDDK NIH HHS R00DK091318-02NIDDK NIH HHS R01 DK041544NIDDK NIH HHS R01-DK041544NIGMS NIH HHS T32 GM067553NIGMS NIH HHS T32GM067553
6 · The paper itself

Abstract

The aetiology of human fibrolamellar hepatocellular carcinomas (hFL-HCCs), cancers occurring increasingly in children to young adults, is poorly understood. We present a transplantable tumour line, maintained in immune-compromised mice, and validate it as a bona fide model of hFL-HCCs by multiple methods. RNA-seq analysis confirms the presence of a fusion transcript (DNAJB1-PRKACA) characteristic of hFL-HCC tumours. The hFL-HCC tumour line is highly enriched for cancer stem cells as indicated by limited dilution tumourigenicity assays, spheroid formation and flow cytometry. Immunohistochemistry on the hFL-HCC model, with parallel studies on 27 primary hFL-HCC tumours, provides robust evidence for expression of endodermal stem cell traits. Transcriptomic analyses of the tumour line and of multiple, normal hepatic lineage stages reveal a gene signature for hFL-HCCs closely resembling that of biliary tree stem cells--newly discovered precursors for liver and pancreas. This model offers unprecedented opportunities to investigate mechanisms underlying hFL-HCCs pathogenesis and potential therapies.

Indexed as

Gene Expression Regulation, NeoplasticAdolescentAdultAnimalsBiomarkers, TumorCarcinoma, HepatocellularCell Line, TumorCyclic AMP-Dependent Protein Kinase Catalytic SubunitsFemaleFlow CytometryGene Expression ProfilingHSP40 Heat-Shock ProteinsHumansImmunohistochemistryLiver NeoplasmsMaleBiomarkers, TumorCyclic AMP-Dependent Protein Kinase Catalytic SubunitsDNAJB1 protein, humanHSP40 Heat-Shock ProteinsMutant Chimeric ProteinsPRKACA protein, humanRNA, Messenger

Identifiers

PMID26437858
PMCPMC4600730
OpenAlexW2184511333

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.