Evidence map›Paper›PMID 26437602›Full record

ArticleCell metabolism2015

Global Phosphoproteomic Analysis of Human Skeletal Muscle Reveals a Network of Exercise-Regulated Kinases and AMPK Substrates.

Nolan J Hoffman, Benjamin L Parker, Rima Chaudhuri, Kelsey H Fisher-Wellman, Maximilian Kleinert, Sean J Humphrey, Pengyi Yang, Mira Holliday, Sophie Trefely, Daniel J Fazakerley and 8 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cell metabolism, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 252 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
252citing papers in PubMed, 4 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

252 citing papers in PubMed, 4 syntheses or guidelines pooled it, 433 citations in OpenAlex.

  1. Pooled it
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  10. A quantitative redox proteome of the human muscle response to exercise.bioRxiv : the preprint server for biology · 2026
    Article
  11. Regulation of Translation by PKA Signaling Pathway.International journal of molecular sciences · 2026
    Review
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192 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Nolan J HoffmanCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Benjamin L ParkerCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Rima ChaudhuriCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Kelsey H Fisher-WellmanGarvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia.
Maximilian KleinertGarvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia; University of Copenhagen, August Krogh Centre, Department of Nutrition, Exercise and Sports, Copenhagen 2100, Denmark.
Sean J HumphreyGarvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia.
Pengyi YangGarvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia; Systems Biology Section, Epigenetics & Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA.
Mira HollidayCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Sophie TrefelyGarvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia.
Daniel J FazakerleyCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Jacqueline StöckliCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
James G BurchfieldCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia.
Thomas E JensenUniversity of Copenhagen, August Krogh Centre, Department of Nutrition, Exercise and Sports, Copenhagen 2100, Denmark.
Raja JothiSystems Biology Section, Epigenetics & Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA.
Bente KiensUniversity of Copenhagen, August Krogh Centre, Department of Nutrition, Exercise and Sports, Copenhagen 2100, Denmark.
Jørgen F P WojtaszewskiUniversity of Copenhagen, August Krogh Centre, Department of Nutrition, Exercise and Sports, Copenhagen 2100, Denmark.
Erik A RichterUniversity of Copenhagen, August Krogh Centre, Department of Nutrition, Exercise and Sports, Copenhagen 2100, Denmark.
David E JamesCharles Perkins Centre, School of Molecular Bioscience, The University of Sydney, Sydney, NSW 2006, Australia; School of Medicine, The University of Sydney, Sydney, NSW 2006, Australia. Electronic address: david.james@sydney.edu.au.
University of Sydney · AUUniversity of Copenhagen · DKGarvan Institute of Medical Research · AUNational Institute of Environmental Health Sciences · USNational Institutes of Health · US

Funding

Gene regulatory elements, networks, and mechanismsZIAES102625 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI JOTHI, RAJA · 2009 to 2025
$27.4M
Intramural NIH HHS ZIA ES102625
6 · The paper itself

Abstract

Exercise is essential in regulating energy metabolism and whole-body insulin sensitivity. To explore the exercise signaling network, we undertook a global analysis of protein phosphorylation in human skeletal muscle biopsies from untrained healthy males before and after a single high-intensity exercise bout, revealing 1,004 unique exercise-regulated phosphosites on 562 proteins. These included substrates of known exercise-regulated kinases (AMPK, PKA, CaMK, MAPK, mTOR), yet the majority of kinases and substrate phosphosites have not previously been implicated in exercise signaling. Given the importance of AMPK in exercise-regulated metabolism, we performed a targeted in vitro AMPK screen and employed machine learning to predict exercise-regulated AMPK substrates. We validated eight predicted AMPK substrates, including AKAP1, using targeted phosphoproteomics. Functional characterization revealed an undescribed role for AMPK-dependent phosphorylation of AKAP1 in mitochondrial respiration. These data expose the unexplored complexity of acute exercise signaling and provide insights into the role of AMPK in mitochondrial biochemistry.

Indexed as

AdultA Kinase Anchor ProteinsAMP-Activated Protein KinasesEnergy MetabolismExerciseHumansMachine LearningMaleMitochondriaMuscle, SkeletalPhosphoproteinsPhosphorylationPhysical Conditioning, AnimalSignal TransductionSubstrate SpecificityAKAP1 protein, humanA Kinase Anchor ProteinsAMP-Activated Protein KinasesPhosphoproteins

Identifiers

PMID26437602
PMCPMC4635038
OpenAlexW1839260472

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.