Evidence map›Paper›PMID 26437428›Full record

ArticleViruses2015

Isolation and Genome Characterization of the Virulent Staphylococcus aureus Bacteriophage SA97.

Yoonjee Chang, Hakdong Shin, Ju-Hoon Lee, Chul Jong Park, Soon-Young Paik, Sangryeol Ryu

Abstract read
In one paragraph

Article in Viruses, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. vB_EcoM-P896 coliphage isolated from duck sewage can lyse both intestinal pathogenic Escherichia coli and extraintestinal pathogenic E. coli.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  7. Article
  8. Article
  9. Review
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  15. APTC-C-SA01: A Novel Bacteriophage Cocktail TargetingInternational journal of molecular sciences · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Overview of the risks of Staphylococcus aureus infections and their control by bacteriophages and bacteriophage-encoded products.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yoonjee ChangDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, Research Institute of Agriculture and Life Sciences, and Center for Food and Bioconvergence, Seoul National University, Seoul 151-921, Korea. yjchang10@snu.ac.kr.
Hakdong ShinDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, Research Institute of Agriculture and Life Sciences, and Center for Food and Bioconvergence, Seoul National University, Seoul 151-921, Korea. hakdong.shin@gmail.com.
Ju-Hoon LeeDepartment of Food Science and Biotechnology, Kyung Hee University, Yongin 446-701, Korea. juhlee@khu.ac.kr.
Chul Jong ParkDepartment of Dermatology, College of Medicine, the Catholic University of Korea, Seoul 137-701, Korea. cjpark777smp@gmail.com.
Soon-Young PaikDepartment of Microbiology, College of Medicine, the Catholic University of Korea, Seoul 137-701, Korea. paik@catholic.ac.kr.
Sangryeol RyuDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, Research Institute of Agriculture and Life Sciences, and Center for Food and Bioconvergence, Seoul National University, Seoul 151-921, Korea. sangryu@snu.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel bacteriophage that infects S. aureus, SA97, was isolated and characterized. The phage SA97 belongs to the Siphoviridae family, and the cell wall teichoic acid (WTA) was found to be a host receptor of the phage SA97. Genome analysis revealed that SA97 contains 40,592 bp of DNA encoding 54 predicted open reading frames (ORFs), and none of these genes were related to virulence or drug resistance. Although a few genes associated with lysogen formation were detected in the phage SA97 genome, the phage SA97 produced neither lysogen nor transductant in S. aureus. These results suggest that the phage SA97 may be a promising candidate for controlling S. aureus.

Indexed as

Genome, ViralCluster AnalysisDNA, ViralGene OrderLysogenyMolecular Sequence DataOpen Reading FramesPhylogenyReceptors, VirusSequence Analysis, DNASequence HomologySiphoviridaeStaphylococcus aureusStaphylococcus PhagesTeichoic AcidsTransduction, GeneticDNA, ViralReceptors, VirusTeichoic Acidsbacteriophagegenome analysisStaphylococcus aureus

Identifiers

PMID26437428
PMCPMC4632378

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.