Evidence map›Paper›PMID 26436121›Full record

ArticleVirusdisease2015

Heterozygosity at the SNP (rs136500299) of ITGB6 receptor gene possibly influences the susceptibility among crossbred bull to foot and mouth disease infection.

Rani Singh, Rajib Deb, Umesh Singh, T V Raja, Rani Alex, Sushil Kumar, Soumendu Chakraborti, Rafeeque R Alyethodi, Sheetal Sharma, Gyanendra Sengar

Open access · bronzeAbstract read
In one paragraph

Article in Virusdisease, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Rani SinghMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Rajib DebMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Umesh SinghMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
T V RajaMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Rani AlexMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Sushil KumarMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Soumendu ChakrabortiIndian Veterinary Research Institute, Izatnagar, 243122 Uttar Pradesh India.
Rafeeque R AlyethodiMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Sheetal SharmaMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Gyanendra SengarMolecular Genetics Laboratory, Central Institute for Research on Cattle, Indian Council of Agricultural Research, Meerut, 250 001 Uttar Pradesh India.
Central Institute for Research on Cattle · INIndian Council of Agricultural Research · INIndian Veterinary Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zebu (Bos indicus) cattle are known to be resistant against foot and mouth disease virus (FMDV) compared to taurine (Bos taurus). To understand the susceptibility of two cattle species to FMDV infection in terms of viral receptors, the present study reports the cloning, characterization and sequence analysis of Zebu ITGB6 gene. The complete CDS of zebu ITGB6 was 2367 basepair in length with 788 amino acid residues. The zebu integrin shares common structural and functional elements with taurine and other species. We identified an amino substitution (S665 to F665) presents in ITGB6 gene among zebu and taurine as SNP (rs136500299). Further, we determined and compared the structural differences of ITGB6 receptor gene among zebu and taurine species. To elucidate the influence of the SNP on the susceptibility of cattle to FMDV infection, a tetra ARMS PCR based genetic screening was performed among Zebu and crossbred cattle. Our observation revealed that, the targeted SNP are strongly (P < 0.05) associated with FMD susceptibility among Frieswal (HF X Sahiwal) crossbred cattle.

Indexed as

FMDVFrieswalITGB6SNP

Identifiers

PMID26436121
PMCPMC4585059
OpenAlexW2109640452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.