Evidence map›Paper›PMID 26434722›Full record

ArticleGenetics2016

Identifying Regulators of Morphogenesis Common to Vertebrate Neural Tube Closure and Caenorhabditis elegans Gastrulation.

Jessica L Sullivan-Brown, Panna Tandon, Kim E Bird, Daniel J Dickinson, Sophia C Tintori, Jennifer K Heppert, Joy H Meserve, Kathryn P Trogden, Sara K Orlowski, Frank L Conlon and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. A GATA factor radiation inbioRxiv : the preprint server for biology · 2025
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  6. Evolutionary Change in Gut Specification inJournal of developmental biology · 2023
    Review
  7. Article
  8. Assays for Apical Constriction Using the Xenopus Model.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  9. Review
  10. Article
  11. Genetics · 2020
    Review
  12. Article
  13. Review
  14. A high-content imaging approach to profileDevelopment (Cambridge, England) · 2019
    Article
  15. Article
  16. The C. elegans model in toxicity testing.Journal of applied toxicology : JAT · 2017
    Review
  17. Control of developmental networks by Rac/Rho small GTPases: How cytoskeletal changes during embryogenesis are orchestrated.BioEssays : news and reviews in molecular, cellular and developmental biology · 2016
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Jessica L Sullivan-BrownDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599 Department of Biology, West Chester University, West Chester, Pennsylvania 19383 jsullivan-brown@wcupa.edu.
Panna TandonDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Kim E BirdDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Daniel J DickinsonDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599 Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, North Carolina 27599.
Sophia C TintoriDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Jennifer K HeppertDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Joy H MeserveDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599 Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, North Carolina 27599.
Kathryn P TrogdenDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Sara K OrlowskiDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Frank L ConlonDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599 Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, North Carolina 27599 Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
Bob GoldsteinDepartment of Biology, University of North Carolina at Chapel Hill, North Carolina 27599 Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, North Carolina 27599 Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, North Carolina 27599.
University of North Carolina at Chapel Hill · US

Funding

Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Mechanisms of C. elegans GastrulationR01GM083071 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GOLDSTEIN, ROBERT P · 2008 to 2019
$3.7M
Functional investigation of the TBX20 cardiac interactomeR01HL127640 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO, CRISTEA, ILEANA M. · 2015 to 2018
$2.5M
Direct and Quantitative Proteomic Approaches in XenopusR21HD073044 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO, CRISTEA, ILEANA M. · 2013 to 2014
$436k
Using shared mechanisms of morphogenesis to study neural tube defectsF32GM090447 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN-BROWN, JESSICA LEE · 2010 to 2012
$104k
Identifying regulators of morphogenesis with a transcriptional lineage of C. elegans developmentF31HD088128 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TINTORI, SOPHIA · 2016 to 2017
$68k
NCI NIH HHS T32 CA009156NCI NIH HHS T32-CA009156NHLBI NIH HHS R01 HL127640NICHD NIH HHS F31 HD088128NICHD NIH HHS R21 HD073044NICHD NIH HHS R21-HD073044NIGMS NIH HHS F32 GM090447NIGMS NIH HHS F32-GM090447NIGMS NIH HHS R01 GM083071NIGMS NIH HHS R01-GM083071NIH HHS P40 OD010440NIH HHS P40-OD010440
6 · The paper itself

Abstract

Neural tube defects including spina bifida are common and severe congenital disorders. In mice, mutations in more than 200 genes can result in neural tube defects. We hypothesized that this large gene set might include genes whose homologs contribute to morphogenesis in diverse animals. To test this hypothesis, we screened a set of Caenorhabditis elegans homologs for roles in gastrulation, a topologically similar process to vertebrate neural tube closure. Both C. elegans gastrulation and vertebrate neural tube closure involve the internalization of surface cells, requiring tissue-specific gene regulation, actomyosin-driven apical constriction, and establishment and maintenance of adhesions between specific cells. Our screen identified several neural tube defect gene homologs that are required for gastrulation in C. elegans, including the transcription factor sptf-3. Disruption of sptf-3 in C. elegans reduced the expression of early endodermally expressed genes as well as genes expressed in other early cell lineages, establishing sptf-3 as a key contributor to multiple well-studied C. elegans cell fate specification pathways. We also identified members of the actin regulatory WAVE complex (wve-1, gex-2, gex-3, abi-1, and nuo-3a). Disruption of WAVE complex members reduced the narrowing of endodermal cells' apical surfaces. Although WAVE complex members are expressed broadly in C. elegans, we found that expression of a vertebrate WAVE complex member, nckap1, is enriched in the developing neural tube of Xenopus. We show that nckap1 contributes to neural tube closure in Xenopus. This work identifies in vivo roles for homologs of mammalian neural tube defect genes in two manipulable genetic model systems.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell CycleCell MembraneEmbryonic DevelopmentEndodermGastrulationGenes, HelminthHumansMorphogenesisNeural TubeRNA, HelminthRNA InterferenceSequence Analysis, RNATranscription FactorsCaenorhabditis elegans ProteinsGEX-3 protein, C elegansRNA, HelminthTranscription Factorswve-1 protein, C elegansC. elegansgastrulationMorphogenesis

Identifiers

PMID26434722
PMCPMC4701080
OpenAlexW2223707486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.