Evidence map›Paper›PMID 26433650›Full record

ArticleJournal of comparative physiology. B, Biochemical, systemic, and environmental physiology2016

Peroxiredoxin 6 from the Antarctic emerald rockcod: molecular characterization of its response to warming.

A M Tolomeo, A Carraro, R Bakiu, S Toppo, S P Place, D Ferro, G Santovito

Abstract read
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Article in Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 67 citations in OpenAlex.

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  12. Copper/Zinc Superoxide Dismutase from the Crocodile IcefishAntioxidants (Basel, Switzerland) · 2020
    Article
  13. Article
  14. Article
  15. The phospholipase AJournal of lipid research · 2018
    Review
  16. Article
  17. Review
  18. Cu,Zn Superoxide Dismutase Genes inFrontiers in immunology · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

A M TolomeoDepartment of Biology, University of Padova, via U. Bassi 58/B, 35100, Padua, Italy.
A CarraroDepartment of Biology, University of Padova, via U. Bassi 58/B, 35100, Padua, Italy.
R BakiuDepartment of Aquaculture and Fisheries, Agricultural University of Tirana, Tirana, Albania.
S ToppoDepartment of Molecular Medicine, University of Padova, Padua, Italy.
S P PlaceDepartment of Biology, Sonoma State University, Rohnert Park, CA, USA.
D FerroInstitute for Evolution and Biodiversity, Westfälische Wilhelms-Universität, Münster, Germany.
G SantovitoDepartment of Biology, University of Padova, via U. Bassi 58/B, 35100, Padua, Italy. gianfranco.santovito@unipd.it.
University of Padua · ITAgricultural University of Tirana · ALSonoma State University · USUniversity of Münster · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present study, we describe the purification and molecular characterization of two peroxiredoxins (Prdxs), referred to as Prdx6A and Prdx6B, from Trematomus bernacchii, a teleost widely distributed in many areas of Antarctica, that plays a pivotal role in the Antarctic food chain. The two putative amino acid sequences were compared with Prdx6 orthologs from other fish, highlighting a high percentage of identity and similarity with the respective variant, in particular for the residues that are essential for the characteristic peroxidase and phospholipase activities of these enzymes. Phylogenetic analyses suggest the appearance of the two prdx6 genes through a duplication event before the speciation that led to the differentiation of fish families and that the evolution of the two gene variants seems to proceed together with the evolution of fish orders and families. The temporal expression of Prdx6 mRNA in response to short-term thermal stress showed a general upregulation of prdx6b and inhibition of prdx6a, suggesting that the latter is the variant most affected by temperature increase. The variations of mRNA accumulation are more conspicuous in heart than the liver, probably related to behavioral changes of the specimens in response to elevated temperature. These data, together with the peculiar differences between the molecular structures of the two Prdx6s in T. bernacchii as well as in the tropical species Stegastes partitus, suggest an adaptation that allowed these poikilothermic aquatic vertebrates to colonize very different environments, characterized by different temperature ranges.

Indexed as

TemperatureAmino Acid SequenceAnimalsAntarctic RegionsCloning, MolecularFishesGene Expression RegulationLiverModels, MolecularMolecular Sequence DataMyocardiumPeroxiredoxin VIPhylogenyProtein ConformationPeroxiredoxin VIAntarcticaFishGene expressionMolecular evolutionPeroxiredoxins

Identifiers

PMID26433650
OpenAlexW1842052680

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.