Evidence map›Paper›PMID 26432460›Full record

ArticleApplied microbiology and biotechnology2016

Production of the polyketide 6-deoxyerythronolide B in the heterologous host Bacillus subtilis.

Jana Kumpfmüller, Karen Methling, Lei Fang, Blaine A Pfeifer, Michael Lalk, Thomas Schweder

Open access · hybridAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. EngineeringMetabolic engineering communications · 2025
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  3. Response surface methodology to optimize theJournal of food science and technology · 2025
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  12. Recent advances in CRISPR/Cas9 mediated genome editing in Bacillus subtilis.World journal of microbiology & biotechnology · 2018
    Review
  13. Review
  14. Review
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  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jana KumpfmüllerPharmaceutical Biotechnology, Institute of Pharmacy, Ernst-Moritz-Arndt-University, Felix-Hausdorff-Str. 3, 17489, Greifswald, Germany.
Karen MethlingInstitute of Biochemistry, Ernst-Moritz-Arndt-University, Felix-Hausdorff-Str. 4, 17489, Greifswald, Germany.
Lei FangDepartment of Chemical and Biological Engineering, State University of New York at Buffalo, 904 Furnas Hall, Buffalo, NY, 14260-4200, USA.
Blaine A PfeiferDepartment of Chemical and Biological Engineering, State University of New York at Buffalo, 904 Furnas Hall, Buffalo, NY, 14260-4200, USA.
Michael LalkInstitute of Biochemistry, Ernst-Moritz-Arndt-University, Felix-Hausdorff-Str. 4, 17489, Greifswald, Germany.
Thomas SchwederPharmaceutical Biotechnology, Institute of Pharmacy, Ernst-Moritz-Arndt-University, Felix-Hausdorff-Str. 3, 17489, Greifswald, Germany. schweder@uni-greifswald.de.
Universität Greifswald · DEUniversity at Buffalo, State University of New York · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyketides, such as erythromycin, are complex natural products with diverse therapeutic applications. They are synthesized by multi-modular megaenzymes, so-called polyketide synthases (PKSs). The macrolide core of erythromycin, 6-deoxyerythronolide B (6dEB), is produced by the deoxyerythronolide B synthase (DEBS) that consists of three proteins each with a size of 330-370 kDa. We cloned and investigated the expression of the corresponding gene cluster from Saccharopolyspora erythraea, which comprises more than 30 kb, in Bacillus subtilis. It is shown that the DEBS genes are functionally expressed in B. subtilis when the native eryAI-III operon was separated into three individual expression cassettes with optimized ribosomal binding sites. A synthesis of 6dEB could be detected by using the acetoin-inducible acoA promoter and a fed-batch simulating EnBase-cultivation strategy. B. subtilis was capable of the secretion of 6dEB into the medium. In order to improve the 6dEB production, several genomic modifications of this production strain were tested. This included the knockout of the native secondary metabolite clusters of B. subtilis for the synthesis of surfactin (26 kb), bacillaene (76 kb), and plipastatin (38 kb). It is revealed that the deletion of the prpBD operon, responsible for propionyl-CoA utilization, resulted in a significant increase of the 6dEB product yield when exogenous propionate is provided. Although the presented B. subtilis 6dEB production strain is not competitive with established Escherichia coli 6dEB production strains, the results of this study indicate that B. subtilis is a suitable heterologous host for the secretory production of a complex polyketide.

Indexed as

Bacillus subtilisBacterial ProteinsErythromycinMetabolic EngineeringPolyketidesSaccharopolyspora6-deoxyerythronolide BBacterial ProteinsErythromycinPolyketidesacoA promoterBacillus subtilisDeoxyerythronolide B synthaseHeterologous expressionMetabolic engineeringPolyketide

Identifiers

PMID26432460
PMCPMC4717160
OpenAlexW1869731607

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.