Evidence map›Paper›PMID 26432395›Full record

ArticleMolecular phylogenetics and evolution2016

Genetic and structural analyses of cytochrome P450 hydroxylases in sex hormone biosynthesis: Sequential origin and subsequent coevolution.

Jared V Goldstone, Munirathinam Sundaramoorthy, Bin Zhao, Michael R Waterman, John J Stegeman, David C Lamb

Abstract read
In one paragraph

Article in Molecular phylogenetics and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
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  7. A Review onGenes · 2022
    Review
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  11. Article
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  13. Article
  14. Activity of Zearalenone in the Porcine Intestinal Tract.Molecules (Basel, Switzerland) · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jared V GoldstoneBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA.
Munirathinam SundaramoorthyDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232-0146, USA.
Bin ZhaoDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232-0146, USA.
Michael R WatermanDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232-0146, USA.
John J StegemanBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA. Electronic address: jstegeman@whoi.edu.
David C LambInstitute of Life Science, Medical School, Swansea University, Singleton Park, Swansea SA2 8PP, UK. Electronic address: D.C.Lamb@swansea.ac.uk.
Vanderbilt University · USWoods Hole Oceanographic Institution · USSwansea University · GB

Funding

Training CoreP42ES007381 · NIEHS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SHERR, DAVID H · 1995 to 2019
$46.1M
Woods Hole Center for Oceans and Human HealthP50ES012742 · NIEHS · WOODS HOLE OCEANOGRAPHIC INSTITUTION · PI STEGEMAN, JOHN J · 2004 to 2009
$2.8M
Nomenclature of Human and Vertebrate GenesU41HG003345 · NHGRI · EUROPEAN MOLECULAR BIOLOGY LABORATORY · PI BIRNEY, EWAN, BRUFORD, ELSPETH · 2013 to 2017
$2.4M
NHGRI NIH HHS U41 HG003345NHGRI NIH HHS U41HG003345NIEHS NIH HHS P42 ES007381NIEHS NIH HHS P42ES007381NIEHS NIH HHS P50 ES012742Wellcome Trust
6 · The paper itself

Abstract

Biosynthesis of steroid hormones in vertebrates involves three cytochrome P450 hydroxylases, CYP11A1, CYP17A1 and CYP19A1, which catalyze sequential steps in steroidogenesis. These enzymes are conserved in the vertebrates, but their origin and existence in other chordate subphyla (Tunicata and Cephalochordata) have not been clearly established. In this study, selected protein sequences of CYP11A1, CYP17A1 and CYP19A1 were compiled and analyzed using multiple sequence alignment and phylogenetic analysis. Our analyses show that cephalochordates have sequences orthologous to vertebrate CYP11A1, CYP17A1 or CYP19A1, and that echinoderms and hemichordates possess CYP11-like but not CYP19 genes. While the cephalochordate sequences have low identity with the vertebrate sequences, reflecting evolutionary distance, the data show apparent origin of CYP11 prior to the evolution of CYP19 and possibly CYP17, thus indicating a sequential origin of these functionally related steroidogenic CYPs. Co-occurrence of the three CYPs in early chordates suggests that the three genes may have coevolved thereafter, and that functional conservation should be reflected in functionally important residues in the proteins. CYP19A1 has the largest number of conserved residues while CYP11A1 sequences are less conserved. Structural analyses of human CYP11A1, CYP17A1 and CYP19A1 show that critical substrate binding site residues are highly conserved in each enzyme family. The results emphasize that the steroidogenic pathways producing glucocorticoids and reproductive steroids are several hundred million years old and that the catalytic structural elements of the enzymes have been conserved over the same period of time. Analysis of these elements may help to identify when precursor functions linked to these enzymes first arose.

Indexed as

Biological EvolutionPhylogenyAmino Acid SequenceAnimalsBinding SitesChordataGonadal Steroid HormonesHumansLikelihood FunctionsSteroid HydroxylasesGonadal Steroid HormonesSteroid HydroxylasesCytochrome P450Enzyme evolutionEstrogenPregnenoloneProgesteroneSteroid biosynthesis

Identifiers

PMID26432395
PMCPMC4801120
OpenAlexW1833590814

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.