Evidence map›Paper›PMID 26431974›Full record

ArticleApplied and environmental microbiology2015

Microbiological oxidation of antimony(III) with oxygen or nitrate by bacteria isolated from contaminated mine sediments.

Lee R Terry, Thomas R Kulp, Heather Wiatrowski, Laurence G Miller, Ronald S Oremland

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
  2. Two complete genome sequences of antimonite-oxidizing bacteria,Microbiology resource announcements · 2025
    Article
  3. Article
  4. Article
  5. Widespread Distribution of theEnvironmental science & technology · 2023
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  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Draft Genome Sequence of the Antimony-OxidizingMicrobiology resource announcements · 2020
    Article
  14. Draft Genome Sequence ofMicrobiology resource announcements · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Lee R TerryDepartment of Geological Sciences and Environmental Studies, Binghamton University, SUNY, Binghamton, New York, USA.
Thomas R KulpDepartment of Geological Sciences and Environmental Studies, Binghamton University, SUNY, Binghamton, New York, USA tkulp@binghamton.edu.
Heather WiatrowskiDepartment of Biology, Clark University, Worcester, Massachusetts, USA.
Laurence G MillerU.S. Geological Survey, Menlo Park, California, USA.
Ronald S OremlandU.S. Geological Survey, Menlo Park, California, USA.
Binghamton University · USUnited States Geological Survey · USClark University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial oxidation of arsenite [As(III)] is a well-studied and important biogeochemical pathway that directly influences the mobility and toxicity of arsenic in the environment. In contrast, little is known about microbiological oxidation of the chemically similar anion antimonite [Sb(III)]. In this study, two bacterial strains, designated IDSBO-1 and IDSBO-4, which grow on tartrate compounds and oxidize Sb(III) using either oxygen or nitrate, respectively, as a terminal electron acceptor, were isolated from contaminated mine sediments. Both isolates belonged to the Comamonadaceae family and were 99% similar to previously described species. We identify these novel strains as Hydrogenophaga taeniospiralis strain IDSBO-1 and Variovorax paradoxus strain IDSBO-4. Both strains possess a gene with homology to the aioA gene, which encodes an As(III)-oxidase, and both oxidize As(III) aerobically, but only IDSBO-4 oxidized Sb(III) in the presence of air, while strain IDSBO-1 could achieve this via nitrate respiration. Our results suggest that expression of aioA is not induced by Sb(III) but may be involved in Sb(III) oxidation along with an Sb(III)-specific pathway. Phylogenetic analysis of proteins encoded by the aioA genes revealed a close sequence similarity (90%) among the two isolates and other known As(III)-oxidizing bacteria, particularly Acidovorax sp. strain NO1. Both isolates were capable of chemolithoautotrophic growth using As(III) as a primary electron donor, and strain IDSBO-4 exhibited incorporation of radiolabeled [(14)C]bicarbonate while oxidizing Sb(III) from Sb(III)-tartrate, suggesting possible Sb(III)-dependent autotrophy. Enrichment cultures produced the Sb(V) oxide mineral mopungite and lesser amounts of Sb(III)-bearing senarmontite as precipitates.

Indexed as

AntimonyAutotrophic ProcessesBase SequenceChemoautotrophic GrowthComamonadaceaeDNA, BacterialGeologic SedimentsIdahoMiningMolecular Sequence DataNitratesOxidation-ReductionOxidoreductasesOxygenPhylogenyRNA, Ribosomal, 16SantimoniteAntimonyDNA, BacterialNitratesOxidoreductasesOxygenRNA, Ribosomal, 16S

Identifiers

PMID26431974
PMCPMC4644646
OpenAlexW2176749845

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.