Evidence map›Paper›PMID 26431425›Full record

ArticlePLoS pathogens2015

Geminivirus Activates ASYMMETRIC LEAVES 2 to Accelerate Cytoplasmic DCP2-Mediated mRNA Turnover and Weakens RNA Silencing in Arabidopsis.

Jian Ye, Junyi Yang, Yanwei Sun, Pingzhi Zhao, Shiqiang Gao, Choonkyun Jung, Jing Qu, Rongxiang Fang, Nam-Hai Chua

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 72 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Jian YeTemasek Life Sciences Laboratory, National University of Singapore, Singapore; State Key laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Junyi YangLaboratory of Plant Molecular Biology, Rockefeller University, New York, New York, United States of America; Institute of Biochemistry, National Chung Hsing University, Taichung, Taiwan.
Yanwei SunTemasek Life Sciences Laboratory, National University of Singapore, Singapore; State Key laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Pingzhi ZhaoState Key laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Shiqiang GaoTemasek Life Sciences Laboratory, National University of Singapore, Singapore.
Choonkyun JungLaboratory of Plant Molecular Biology, Rockefeller University, New York, New York, United States of America.
Jing QuTemasek Life Sciences Laboratory, National University of Singapore, Singapore.
Rongxiang FangState Key laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Nam-Hai ChuaLaboratory of Plant Molecular Biology, Rockefeller University, New York, New York, United States of America.
Temasek Life Sciences Laboratory · SGRockefeller University · USState Key Laboratory of Plant Genomics · CNNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aberrant viral RNAs produced in infected plant cells serve as templates for the synthesis of dsRNAs. The derived virus-related small interfering RNAs (siRNA) mediate cleavage of viral RNAs by post-transcriptional gene silencing (PTGS), thus blocking virus multiplication. Here, we identified ASYMMETRIC LEAVES2 (AS2) as a new component of plant P body complex which mediates mRNA decapping and degradation. We found that AS2 promotes DCP2 decapping activity, accelerates mRNA turnover rate, inhibits siRNA accumulation and functions as an endogenous suppressor of PTGS. Consistent with these findings, as2 mutant plants are resistant to virus infection whereas AS2 over-expression plants are hypersensitive. The geminivirus nuclear shuttle protein BV1 protein, which shuttles between nuclei and cytoplasm, induces AS2 expression, causes nuclear exit of AS2 to activate DCP2 decapping activity and renders infected plants more sensitive to viruses. These principles of gene induction and shuttling of induced proteins to promote mRNA decapping in the cytosol may be used by viral pathogens to weaken antiviral defenses in host plants.

Indexed as

ArabidopsisArabidopsis ProteinsChromatin ImmunoprecipitationCytoplasmEndoribonucleasesGeminiviridaeGene Expression Regulation, PlantHost-Parasite InteractionsImmunoblottingPlant DiseasesPlant ImmunityPlants, Genetically ModifiedPolymerase Chain ReactionReal-Time Polymerase Chain ReactionRNA, MessengerRNA, Small InterferingArabidopsis ProteinsAS2 protein, ArabidopsisDcp2 protein, ArabidopsisEndoribonucleasesRNA, MessengerRNA, Small InterferingTranscription Factors

Identifiers

PMID26431425
PMCPMC4592220
OpenAlexW2196344965

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.