Evidence map›Paper›PMID 26430078›Full record

ArticleClinical chemistry2016

A Novel N-Tetrasaccharide in Patients with Congenital Disorders of Glycosylation, Including Asparagine-Linked Glycosylation Protein 1, Phosphomannomutase 2, and Mannose Phosphate Isomerase Deficiencies.

Wenyue Zhang, Philip M James, Bobby G Ng, Xueli Li, Baoyun Xia, Jiang Rong, Ghazia Asif, Kimiyo Raymond, Melanie A Jones, Madhuri Hegde and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 63 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 2 countries.

Wenyue ZhangDepartment of Human Genetics and.
Philip M JamesDivision of Genetics, Department of Medicine, Children's Hospital Boston, Boston, MA; Department of Pediatrics, Harvard Medical School, Boston, MA;
Bobby G NgHuman Genetics Program, Sanford Children's Health Research Center, Sanford-Burnham Medical Research Institute, La Jolla, CA;
Xueli LiPalmieri Metabolic Disease Laboratory, Children's Hospital of Philadelphia, Philadelphia, PA;
Baoyun XiaDepartment of Human Genetics and.
Jiang RongDepartment of Human Genetics and.
Ghazia AsifDepartment of Human Genetics and.
Kimiyo RaymondMayo Biochemical Genetics Laboratory, Mayo Medical School, Rochester, MN;
Melanie A JonesDepartment of Human Genetics and.
Madhuri HegdeDepartment of Human Genetics and.
Tongzhong JuPalmieri Metabolic Disease Laboratory, Children's Hospital of Philadelphia, Philadelphia, PA;
Richard D CummingsDepartment of Biochemistry, Emory University, Atlanta, GA;
Katie ClarksonMayo Biochemical Genetics Laboratory, Mayo Medical School, Rochester, MN;
Tim WoodGreenwood Genetics Center, Greenwood, SC;
Cornelius F BoerkoelDepartment of Medical Genetics, University of British Columbia, Vancouver, BC, Canada;
Hudson H FreezeHuman Genetics Program, Sanford Children's Health Research Center, Sanford-Burnham Medical Research Institute, La Jolla, CA;
Miao HePalmieri Metabolic Disease Laboratory, Children's Hospital of Philadelphia, Philadelphia, PA; Department of Pathology and Laboratory of Medicine, University of Pennsylvania, Philadelphia, PA. hem@email.chop.edu.
Children's Hospital of Philadelphia · USMayo Clinic in Arizona · USSanford Burnham Prebys Medical Discovery Institute · USEmory University · USGreenwood Genetic Center · USHarvard University · USUniversity of British Columbia · CAUniversity of Pennsylvania · US

Funding

New Congenital Disorders of Glycosylation: Therapy and ModelsR01DK099551 · NIDDK · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Hudson H. Freeze · 2014 to 2026
$6.7M
NIDDK NIH HHS R01 DK099551NIDDK NIH HHS R01 DK99551
6 · The paper itself

Abstract

backgroundPrimary deficiencies in mannosylation of N-glycans are seen in a majority of patients with congenital disorders of glycosylation (CDG). We report the discovery of a series of novel N-glycans in sera, plasma, and cultured skin fibroblasts from patients with CDG having deficient mannosylation.

methodWe used LC-MS/MS and MALDI-TOF-MS analysis to identify and quantify a novel N-linked tetrasaccharide linked to the protein core, an N-tetrasaccharide (Neu5Acα2,6Galβ1,4-GlcNAcβ1,4GlcNAc) in plasma, serum glycoproteins, and a fibroblast lysate from patients with CDG caused by ALG1 [ALG1 (asparagine-linked glycosylation protein 1), chitobiosyldiphosphodolichol β-mannosyltransferase], PMM2 (phosphomannomutase 2), and MPI (mannose phosphate isomerase).

resultsGlycoproteins in sera, plasma, or cell lysate from ALG1-CDG, PMM2-CDG, and MPI-CDG patients had substantially more N-tetrasaccharide than unaffected controls. We observed a >80% decline in relative concentrations of the N-tetrasaccharide in MPI-CDG plasma after mannose therapy in 1 patient and in ALG1-CDG fibroblasts in vitro supplemented with mannose.

conclusionsThis novel N-tetrasaccharide could serve as a diagnostic marker of ALG1-, PMM2-, or MPI-CDG for screening of these 3 common CDG subtypes that comprise >70% of CDG type I patients. Its quantification by LC-MS/MS may be useful for monitoring therapeutic efficacy of mannose. The discovery of these small N-glycans also indicates the presence of an alternative pathway in N-glycosylation not recognized previously, but its biological significance remains to be studied.

Indexed as

Chromatography, High Pressure LiquidCongenital Disorders of GlycosylationHumansMannose-6-Phosphate IsomeraseMannosyltransferasesOligosaccharidesPhosphotransferases (Phosphomutases)Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass Spectrometrychitobiosyldiphosphodolichol beta-mannosyltransferaseMannose-6-Phosphate IsomeraseMannosyltransferasesOligosaccharidesphosphomannomutase 2, humanPhosphotransferases (Phosphomutases)

Identifiers

PMID26430078
PMCPMC4819965
OpenAlexW2184837125

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.