Evidence map›Paper›PMID 26429889›Full record

ArticleJournal of medical genetics2015

A human laterality disorder caused by a homozygous deleterious mutation in MMP21.

Zeev Perles, Sungjin Moon, Asaf Ta-Shma, Barak Yaacov, Ludmila Francescatto, Simon Edvardson, Azaria J J T Rein, Orly Elpeleg, Nicholas Katsanis

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
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  8. Human Genetics of Defects of Situs.Advances in experimental medicine and biology · 2024
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  11. Identification of novel compound heterozygous variants in theFrontiers in molecular biosciences · 2023
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  12. Article
  13. Article
  14. Article
  15. Article
  16. Unusual long survival in a case of heterotaxy and polysplenia.Surgical and radiologic anatomy : SRA · 2021
    Article
  17. Role of cilia in the pathogenesis of congenital heart disease.Seminars in cell & developmental biology · 2021
    Review
  18. Article
  19. Identification of aExperimental and therapeutic medicine · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Zeev PerlesDepartment of Pediatric Cardiology, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Sungjin MoonCenter for Human Disease Modeling, Duke University, Durham, North Carolina, USA.
Asaf Ta-ShmaDepartment of Pediatric Cardiology, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Barak YaacovMonique and Jacques Roboh Department of Genetic Research, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Ludmila FrancescattoCenter for Human Disease Modeling, Duke University, Durham, North Carolina, USA.
Simon EdvardsonMonique and Jacques Roboh Department of Genetic Research, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Azaria J J T ReinDepartment of Pediatric Cardiology, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Orly ElpelegMonique and Jacques Roboh Department of Genetic Research, Hadassah, Hebrew University Medical Center, Jerusalem, Israel.
Nicholas KatsanisCenter for Human Disease Modeling, Duke University, Durham, North Carolina, USA.
Hadassah Medical Center · ILDuke University · US

Funding

Genetic and Functional Studies of Human Ciliary SyndromesR01DK072301 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2005 to 2022
$7.2M
The Role of Basa Bodies in Wnt SignalingR01DK075972 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI KATSANIS, NICHOLAS · 2007 to 2015
$3.1M
NIDDK NIH HHS R01 DK072301NIDDK NIH HHS R01DK072301NIDDK NIH HHS R01 DK075972NIDDK NIH HHS R01DK075972
6 · The paper itself

Abstract

backgroundLaterality in the vertebrate embryo is determined by left-right asymmetric gene expression driven by the flow of extraembryonic fluid across the embryonic node. Defects in these processes cause heterotaxy, the abnormal formation and arrangement of visceral organs that can range from complete inversion of symmetry to the selective misarrangement of organs. However, our understanding of the genetic causality for laterality defects in human beings remains relatively limited.

methodsWe performed whole exome sequencing in a consanguineous family with heterotaxia. To interrogate the pathogenic potential of the discovered variant, we used an in vivo system in which the potential of the candidate gene to induce L-R asymmetry was tested by transient suppression and CRISPR/Cas9-induced deletions. We also used in vitro assays to test a possible link between our exome-derived candidate and Notch signaling.

resultsWe identified a homozygous 2 bp deletion in MMP21, encoding matrix metalloproteinase-21, as the sole coding mutation that segregated with the phenotype. Transient suppression or CRISPR/Cas9-mediated deletion of mmp21 in zebrafish embryos induced cardiac looping defects, with concomitant disruption of laterality markers in the lateral plate mesoderm and disrupted notch signalling in vitro and in vivo.

conclusionsOur data implicate loss of MMP21 as a cause of heterotaxy in humans with concomitant defects in Notch signaling. In support of this finding, a homozygous missense mutation in MMP21 was identified previously in mice with N-Ethyl-N-Nitrosourea (ENU)-induced heterotaxy. Taken together, these observations suggest a role of matrix metalloproteinases in the establishment of asymmetric organ development, likely through the regulation of morphogenetic signals.

Indexed as

AnimalsBase SequenceChildConsanguinityDNA Mutational AnalysisExomeFemaleHeterotaxy SyndromeHomozygoteHumansMaleMatrix Metalloproteinases, SecretedPedigreeReceptors, NotchSequence DeletionSignal TransductionMatrix Metalloproteinases, SecretedMMP21 protein, humanReceptors, NotchCongenital heart diseaseDevelopmentalGenetics

Identifiers

PMID26429889
PMCPMC4936483
OpenAlexW2174623150

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.