Evidence map›Paper›PMID 26427652›Full record

ArticleMolecular and cellular endocrinology2016

Lxr regulates lipid metabolic and visual perception pathways during zebrafish development.

Caroline Lucia Pinto, Sharanya Maanasi Kalasekar, Catherine W McCollum, Anne Riu, Philip Jonsson, Justin Lopez, Eric C Swindell, Abdel Bouhlatouf, Patrick Balaguer, Maria Bondesson and 1 more

Abstract read
In one paragraph

Article in Molecular and cellular endocrinology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Recent Application of Zebrafish Models in Atherosclerosis Research.Frontiers in cell and developmental biology · 2021
    Review
  8. Review
  9. Article
  10. Article
  11. Lipid metabolism and carcinogenesis, cancer development.American journal of cancer research · 2018
    Review
  12. Article
  13. Article
  14. LXR Regulation of Brain Cholesterol: From Development to Disease.Trends in endocrinology and metabolism: TEM · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Caroline Lucia PintoCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Sharanya Maanasi KalasekarCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Catherine W McCollumCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Anne RiuCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Philip JonssonCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Justin LopezDepartment of Pediatrics, University of Texas Medical School, Houston, TX 77030, USA.
Eric C SwindellDepartment of Pediatrics, University of Texas Medical School, Houston, TX 77030, USA.
Abdel BouhlatoufInstitut de Recherche en Cancérologie de Montpellier, Institut National de la Santé et de la Recherche Médicale U896, Université Montpellier 1, 34298 Montpellier, France.
Patrick BalaguerInstitut de Recherche en Cancérologie de Montpellier, Institut National de la Santé et de la Recherche Médicale U896, Université Montpellier 1, 34298 Montpellier, France.
Maria BondessonCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA. Electronic address: mbondessonbolin@uh.edu.
Jan-Åke GustafssonCenter for Nuclear Receptors and Cell Signaling, Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA; Department of Biosciences and Nutrition, Novum, Karolinska Institutet, 141 83 Huddinge, Sweden.
University of Houston · USThe University of Texas at Austin · USInserm · FRInstitut de Recherche en Cancérologie de Montpellier · FRKarolinska Institutet · SE

Funding

Detection of Obesogens and Diabetogens by Zebrafish Screening ModelsR21ES020036 · NIEHS · UNIVERSITY OF HOUSTON · PI GUSTAFSSON, JAN-AKE · 2012 to 2013
$371k
NIEHS NIH HHS R21 ES020036NIEHS NIH HHS R21ES020036
6 · The paper itself

Abstract

The Liver X Receptors (LXRs) play important roles in multiple metabolic pathways, including fatty acid, cholesterol, carbohydrate and energy metabolism. To expand the knowledge of the functions of LXR signaling during embryonic development, we performed a whole-genome microarray analysis of Lxr target genes in zebrafish larvae treated with either one of the synthetic LXR ligands T0901317 or GW3965. Assessment of the biological processes enriched by differentially expressed genes revealed a prime role for Lxr in regulating lipid metabolic processes, similarly to the function of LXR in mammals. In addition, exposure to the Lxr ligands induced changes in expression of genes in the neural retina and lens of the zebrafish eye, including the photoreceptor guanylate cyclase activators and lens gamma crystallins, suggesting a potential novel role for Lxr in modulating the transcription of genes associated with visual function in zebrafish. The regulation of expression of metabolic genes was phenotypically reflected in an increased absorption of yolk in the zebrafish larvae, and changes in the expression of genes involved in visual perception were associated with morphological alterations in the retina and lens of the developing zebrafish eye. The regulation of expression of both lipid metabolic and eye specific genes was sustained in 1 month old fish. The transcriptional networks demonstrated several conserved effects of LXR activation between zebrafish and mammals, and also identified potential novel functions of Lxr, supporting zebrafish as a promising model for investigating the role of Lxr during development.

Indexed as

Lipid MetabolismAnimalsBenzenesulfonamidesBenzoatesBenzylaminesCell LineFluorocarbonsGene Expression ProfilingGene Expression Regulation, DevelopmentalHydrocarbons, FluorinatedLens, CrystallineLiver X ReceptorsOligonucleotide Array Sequence AnalysisOrphan Nuclear ReceptorsRetinal NeuronsSulfonamidesBenzenesulfonamidesBenzoatesBenzylaminesFluorocarbonsGW 3965Hydrocarbons, FluorinatedLiver X ReceptorsOrphan Nuclear ReceptorsSulfonamidesT0901317Cholesterol metabolismEyeGene regulationLensLipid metabolismLiver X receptorRetinaYolkZebrafish

Identifiers

PMID26427652
PMCPMC4684448
OpenAlexW1891305169

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.