Evidence map›Paper›PMID 26426826›Full record

ArticleJournal of anatomy2016

Genetics of murine craniofacial morphology: diallel analysis of the eight founders of the Collaborative Cross.

Christopher J Percival, Denise K Liberton, Fernando Pardo-Manuel de Villena, Richard Spritz, Ralph Marcucio, Benedikt Hallgrímsson

Abstract read
In one paragraph

Article in Journal of anatomy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Dentition of the Mugharet El'Aliya Fossil Human Maxilla, Morocco.American journal of biological anthropology · 2025
    Article
  4. Palatal segment contributions to midfacial anterior-posterior growth.bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Modelling the shape of the pig scapula.Genetics, selection, evolution : GSE · 2020
    Article
  9. A comprehensive and comparative phenotypic analysis of the collaborative founder strains identifies new and known phenotypes.Mammalian genome : official journal of the International Mammalian Genome Society · 2020
    Article
  10. Integration and the Developmental Genetics of Allometry.Integrative and comparative biology · 2019
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Christopher J PercivalAlberta Children's Hospital Institute for Child and Maternal Health, University of Calgary, Calgary, AB, Canada.
Denise K LibertonThe McCaig Bone and Joint Institute, University of Calgary, Calgary, AB, Canada.
Fernando Pardo-Manuel de VillenaDepartment of Genetics, Lineberger Comprehensive Cancer Center, University of North Carolina - Chapel Hill, Chapel Hill, NC, USA.
Richard SpritzHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, CO, USA.
Ralph MarcucioThe Orthopaedic Trauma Institute, Department of Orthopaedic Surgery, UCSF School of Medicine, San Francisco, CA, USA.
Benedikt HallgrímssonAlberta Children's Hospital Institute for Child and Maternal Health, University of Calgary, Calgary, AB, Canada.

Funding

The role of continuous phenotypic variation in structural defects of the faceR01DE019638 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Benedikt Hallgrimsson, Ralph S Marcucio · 2010 to 2026
$7.3M
Developing 3D Craniofacial Morphometry Data and Tools to Transform DysmorphologyU01DE024440 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI HALLGRIMSSON, BENEDIKT, KLEIN, OPHIR D · 2014 to 2018
$3.3M
Genetic Determinants of Orofacial Shape and Relationship to Cleft Lip/PalateU01DE020054 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI SPRITZ, RICHARD ANDREW · 2009 to 2014
$2.4M
Developmental mechanisms underlying genotype-phenotype correlationsR01DE021708 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HALLGRIMSSON, BENEDIKT, MARCUCIO, RALPH S · 2011 to 2015
$1.9M
CIHRNIDCR NIH HHS 1U01DE024440NIDCR NIH HHS R01 DE019638NIDCR NIH HHS R01 DE021708NIDCR NIH HHS R01-DE021708NIDCR NIH HHS R01-DE19638NIDCR NIH HHS U01 DE020054NIDCR NIH HHS U01 DE024440
6 · The paper itself

Abstract

Using eight inbred founder strains of the mouse Collaborative Cross (CC) project and their reciprocal F1 hybrids, we quantified variation in craniofacial morphology across mouse strains, explored genetic contributions to craniofacial variation that distinguish the founder strains, and tested whether specific or summary measures of craniofacial shape display stronger additive genetic contributions. This study thus provides critical information about phenotypic diversity among CC founder strains and about the genetic contributions to this phenotypic diversity, which is relevant to understanding the basis of variation in standard laboratory strains and natural populations. Craniofacial shape was quantified as a series of size-adjusted linear dimensions (RDs) and by principal components (PC) analysis of morphological landmarks captured from computed tomography images from 62 of the 64 reciprocal crosses of the CC founder strains. We first identified aspects of skull morphology that vary between these phenotypically 'normal' founder strains and that are defining characteristics of these strains. We estimated the contributions of additive and various non-additive genetic factors to phenotypic variation using diallel analyses of a subset of these strongly differing RDs and the first eight PCs of skull shape variation. We find little difference in the genetic contributions to RD measures and PC scores, suggesting fundamental similarities in the magnitude of genetic contributions to both specific and summary measures of craniofacial phenotypes. Our results indicate that there are stronger additive genetic effects associated with defining phenotypic characteristics of specific founder strains, suggesting these distinguishing measures are good candidates for use in genotype-phenotype association studies of CC mice. Our results add significantly to understanding of genotype-phenotype associations in the skull, which serve as a foundation for modeling the origins of medically and evolutionarily relevant variation.

Indexed as

Crosses, GeneticFounder EffectQuantitative Trait LociAnimalsGenetic Association StudiesGenetic VariationGenotypeMiceMice, Inbred StrainsPhenotypePrincipal Component AnalysisSkullcollaborative crosscraniofacial formdiallelmicro-computed tomographymorphometricsmouse modelsnormal variation

Identifiers

PMID26426826
PMCPMC4694168

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.