Evidence map›Paper›PMID 26425034›Full record

ArticleJournal of Korean medical science2015

HIF-1α Upregulation due to Depletion of the Free Ubiquitin Pool.

Jiyoung Kim, Daeho So, Hyun-Woo Shin, Yang-Sook Chun, Jong-Wan Park

Abstract read
In one paragraph

Article in Journal of Korean medical science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiyoung KimDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.
Daeho SoDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.
Hyun-Woo ShinDepartment of Pharmacology, Seoul National University College of Medicine, Seoul, Korea. ; Cancer Research Institute, Seoul National University College of Medicine, Seoul, Korea.
Yang-Sook ChunDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea. ; Ischemic/Hypoxic Disease Institute, Seoul National University College of Medicine, Seoul, Korea.
Jong-Wan ParkDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea. ; Department of Pharmacology, Seoul National University College of Medicine, Seoul, Korea. ; Cancer Research Institute, Seoul National University College of Medicine, Seoul, Korea. ; Ischemic/Hypoxic Disease Institute, Seoul National University College of Medicine, Seoul, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypoxia-inducible factor 1alpha (HIF-1α), which transactivates a variety of hypoxia-induced genes, is rapidly degraded under nomoxia through the hydroxylation-ubiquitination-proteasome pathway. In this study, we addressed how HIF-1α is stabilized by proteasome inhibitors. The ubiquitin pool was rapidly reduced after proteasome inhibition, followed by the accumulation of non-ubiquitinated HIF-1α. The poly-ubiquitination of HIF-1α was resumed by restoration of free ubiquitin, which suggests that the HIF-1α stabilization under proteasome inhibition is attributed to depletion of the free ubiquitin pool. Ni(2+) and Zn(2+) also stabilized HIF-1α with depletion of the free ubiquitin pool and these effects of metal ions were attenuated by restoration of free ubiquitin. Ni(2+) and Zn(2+) may disturb the recycling of free ubiquitin, as MG132 does. Based on these results, the state of the ubiquitin pool seems to be another critical factor determining the cellular level of HIF-1α.

Indexed as

Cell HypoxiaCell Line, TumorHCT116 CellsHEK293 CellsHumansHypoxia-Inducible Factor 1, alpha SubunitLeupeptinsNickelProteasome Endopeptidase ComplexProteasome InhibitorsUbiquitinUbiquitinationUp-RegulationZincbenzyloxycarbonylleucyl-leucyl-leucine aldehydeHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitLeupeptinsNickelProteasome Endopeptidase ComplexProteasome InhibitorsUbiquitinZincHypoxia-inducible Factor 1, Alpha SubunitPoly-ubiquitinationProteasome InhibitorsTransition Metal IonsUbiquitin Depletion

Identifiers

PMID26425034
PMCPMC4575926

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.