Evidence map›Paper›PMID 26423069›Full record

ArticleMolecular genetics and genomics : MGG2016

GDSL esterase/lipase genes in Brassica rapa L.: genome-wide identification and expression analysis.

Xiangshu Dong, Hankuil Yi, Ching-Tack Han, Ill-Sup Nou, Yoonkang Hur

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In one paragraph

Article in Molecular genetics and genomics : MGG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
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  4. EndophyticJournal of fungi (Basel, Switzerland) · 2025
    Article
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  8. Comparative omics-based characterization, phylogeny and melatonin-mediated expression analyses of GDSL genes in pitaya (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
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  14. Frontiers in plant science · 2023
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Xiangshu DongDepartment of Biological Sciences, College of Biological Science and Biotechnology, Chungnam National University, Taejon, Republic of Korea.
Hankuil YiDepartment of Biological Sciences, College of Biological Science and Biotechnology, Chungnam National University, Taejon, Republic of Korea.
Ching-Tack HanDepartment of Life Science, Sogang University, Seoul, 100-611, Republic of Korea.
Ill-Sup NouDepartment of Horticulture, Sunchon National University, Suncheon, Jeonnam, Republic of Korea.
Yoonkang HurDepartment of Biological Sciences, College of Biological Science and Biotechnology, Chungnam National University, Taejon, Republic of Korea. ykhur@cnu.ac.kr.
Chungnam National University · KRSogang University · KRSunchon National University · KRYunnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GDSL esterase/lipase proteins (GELPs), a very large subfamily of lipolytic enzymes, have been identified in microbes and many plants, but only a few have been characterized with respect to their roles in growth, development, and stress responses. In Brassica crops, as in many other species, genome-wide systematic analysis and functional studies of these genes are still lacking. As a first step to study their function in B. rapa ssp. pekinensis (Chinese cabbage), we comprehensively identified all GELP genes in the genome. We found a total of 121 Brassica rapa GDSL esterase/lipase protein genes (BrGELPs), forming three clades in the phylogenetic analysis (two major and one minor), with an asymmetrical chromosomal distribution. Most BrGELPs possess four strictly conserved residues (Ser-Gly-Asn-His) in four separate conserved regions, along with short conserved and clade-specific blocks, suggesting functional diversification of these proteins. Detailed expression profiling revealed that BrGELPs were expressed in various tissues, including floral organs, implying that BrGELPs play diverse roles in various tissues and during development. Ten percent of BrGELPs were specifically expressed in fertile buds, rather than male-sterile buds, implying their involvement in pollen development. Analyses of EXL6 (extracellular lipase 6) expression and its co-expressed genes in both B. rapa and Arabidopsis, as well as knockdown of this gene in Arabidopsis, revealed that this gene plays an important role in pollen development in both species. The data described in this study will facilitate future investigations of other BrGELP functions.

Indexed as

ArabidopsisBrassica rapaEsterasesGene Expression Regulation, PlantGenome, PlantLipasePhylogenyPlant DevelopmentPollenEsterasesLipaseBrassica rapaBrGELP subfamilyExtracellular lipase 6Pollen developmentSGNH hydrolase

Identifiers

PMID26423069
OpenAlexW1844799240

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.