Evidence map›Paper›PMID 26421945›Full record

ArticleNano letters2015

Optimizing 1-μs-Resolution Single-Molecule Force Spectroscopy on a Commercial Atomic Force Microscope.

Devin T Edwards, Jaevyn K Faulk, Aric W Sanders, Matthew S Bull, Robert Walder, Marc-Andre LeBlanc, Marcelo C Sousa, Thomas T Perkins

Abstract read
In one paragraph

Article in Nano letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Evolution of N-terminal mechanical lability as a determinant for Type III secretion.Protein science : a publication of the Protein Society · 2026
    Article
  2. Review
  3. Article
  4. Silanes to Silatranes: Robust Functionalization for Single-Molecule Force Spectroscopy.Chembiochem : a European journal of chemical biology · 2026
    Article
  5. Review
  6. Article
  7. Mechanochemistry: Fundamental Principles and Applications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  8. Article
  9. Article
  10. Quantifying a light-induced energetic change in bacteriorhodopsin by force spectroscopy.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Quantifying molecular- to cellular-level forces in living cells.Journal of physics D: Applied physics · 2021
    Article
  16. Free-energy changes of bacteriorhodopsin point mutants measured by single-molecule force spectroscopy.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Modulation of a protein-folding landscape revealed by AFM-based force spectroscopy notwithstanding instrumental limitations.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Devin T EdwardsJILA, National Institute of Standards and Technology and University of Colorado , Boulder, Colorado 80309, United States.
Jaevyn K FaulkJILA, National Institute of Standards and Technology and University of Colorado , Boulder, Colorado 80309, United States.
Aric W SandersQuantum Electronics and Photonics Division, National Institute of Standards and Technology , Boulder, Colorado 80305, United States.
Matthew S BullJILA, National Institute of Standards and Technology and University of Colorado , Boulder, Colorado 80309, United States.
Robert WalderJILA, National Institute of Standards and Technology and University of Colorado , Boulder, Colorado 80309, United States.
Marc-Andre LeBlancDepartment of Chemistry and Biochemistry, University of Colorado , Boulder, Colorado 80309, United States.
Marcelo C SousaDepartment of Chemistry and Biochemistry, University of Colorado , Boulder, Colorado 80309, United States.
Thomas T PerkinsJILA, National Institute of Standards and Technology and University of Colorado , Boulder, Colorado 80309, United States.

Funding

Predoctoral Training Molecular BiophysicsT32GM065103 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI FALKE, JOSEPH J · 2002 to 2021
$4.3M
Transport and Insertion of Outer Membrane ProteinsR01AI080709 · NIAID · UNIVERSITY OF COLORADO · PI SOUSA, MARCELO C. · 2009 to 2016
$2.6M
NIAID NIH HHS R01 AI080709NIGMS NIH HHS T32 GM065103
6 · The paper itself

Abstract

Atomic force microscopy (AFM)-based single-molecule force spectroscopy (SMFS) is widely used to mechanically measure the folding and unfolding of proteins. However, the temporal resolution of a standard commercial cantilever is 50-1000 μs, masking rapid transitions and short-lived intermediates. Recently, SMFS with 0.7-μs temporal resolution was achieved using an ultrashort (L = 9 μm) cantilever on a custom-built, high-speed AFM. By micromachining such cantilevers with a focused ion beam, we optimized them for SMFS rather than tapping-mode imaging. To enhance usability and throughput, we detected the modified cantilevers on a commercial AFM retrofitted with a detection laser system featuring a 3-μm circular spot size. Moreover, individual cantilevers were reused over multiple days. The improved capabilities of the modified cantilevers for SMFS were showcased by unfolding a polyprotein, a popular biophysical assay. Specifically, these cantilevers maintained a 1-μs response time while eliminating cantilever ringing (Q ≅ 0.5). We therefore expect such cantilevers, along with the instrumentational improvements to detect them on a commercial AFM, to accelerate high-precision AFM-based SMFS studies.

Indexed as

Microscopy, Atomic ForceSpectrum AnalysisAFMatomic force microscopycantilever dynamicsfocused-ion-beam millingprotein foldingsingle-molecule biophysicssingle-molecule force spectroscopy

Identifiers

PMID26421945
PMCPMC4663051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.