Evidence map›Paper›PMID 26420673›Full record

ArticleNature communications2015

Interplay between arginine methylation and ubiquitylation regulates KLF4-mediated genome stability and carcinogenesis.

Dong Hu, Mert Gur, Zhuan Zhou, Armin Gamper, Mien-Chie Hung, Naoya Fujita, Li Lan, Ivet Bahar, Yong Wan

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 143 citations in OpenAlex.

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46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Dong HuDepartment of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
Mert GurDepartment of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pennsylvania 15213, USA.
Zhuan ZhouDepartment of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
Armin GamperDepartment of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
Mien-Chie HungDepartment of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA.
Naoya FujitaCancer Chemotherapy Center, Japanese Foundation for Cancer Research, Tokyo 135-8550, Japan.
Li LanDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pennsylvania 15213, USA.
Ivet BaharDepartment of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pennsylvania 15213, USA.
Yong WanDepartment of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
University of Pittsburgh · USChina Medical University · TWJapanese Foundation For Cancer Research · JPUPMC Hillman Cancer Center · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Training and EducationU19AI068021 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GREENBERGER, JOEL S · 2005 to 2019
$44.4M
TrainingU54HG008540 · NHGRI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET, COOPER, GREGORY F. · 2014 to 2018
$12.8M
Interplay between Cdh1/APC and Rad17 in DNA damage checkpoints and carcinogenesisR01CA154695 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WAN, YONG · 2011 to 2015
$1.5M
Structural Dynamics of Biomolecular SystemsR01GM086238 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET · 2009 to 2012
$1.3M
NCATS NIH HHS UL1 TR000005NCI NIH HHS CA154695,NCI NIH HHS R01 CA154695NHGRI NIH HHS U54 HG008540NHGRI NIH HHS U54 HG008540-01NIAID NIH HHS 5U19AI068021-6556NIAID NIH HHS U19 AI068021NIGMS NIH HHS R01 GM086238
6 · The paper itself

Abstract

KLF4 is an important regulator of cell-fate decision, including DNA damage response and apoptosis. We identify a novel interplay between protein modifications in regulating KLF4 function. Here we show that arginine methylation of KLF4 by PRMT5 inhibits KLF4 ubiquitylation by VHL and thereby reduces KLF4 turnover, resulting in the elevation of KLF4 protein levels concomitant with increased transcription of KLF4-dependent p21 and reduced expression of KLF4-repressed Bax. Structure-based modelling and simulations provide insight into the molecular mechanisms of KLF4 recognition and catalysis by PRMT5. Following genotoxic stress, disruption of PRMT5-mediated KLF4 methylation leads to abrogation of KLF4 accumulation, which, in turn, attenuates cell cycle arrest. Mutating KLF4 methylation sites suppresses breast tumour initiation and progression, and immunohistochemical stain shows increased levels of both KLF4 and PRMT5 in breast cancer tissues. Taken together, our results point to a critical role for aberrant KLF4 regulation by PRMT5 in genome stability and breast carcinogenesis.

Indexed as

Genomic InstabilityAmino Acid MotifsArginineBreast NeoplasmsCarcinogenesisCell Line, TumorDNA DamageFemaleGene Expression Regulation, NeoplasticHumansKruppel-Like Factor 4Kruppel-Like Transcription FactorsMethylationProtein-Arginine N-MethyltransferasesUbiquitinationArginineKLF4 protein, humanKruppel-Like Factor 4Kruppel-Like Transcription FactorsPRMT5 protein, humanProtein-Arginine N-Methyltransferases

Identifiers

PMID26420673
PMCPMC4598737
OpenAlexW2265354786

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.