ArticleScientific reports2015
Transcriptome analysis of hormone-induced gene expression in Brachypodium distachyon.
Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed, 50 citations in OpenAlex.
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- The root hairless mutant buzz in Brachypodium distachyon shows increased nitrate uptake and signaling but does not affect overall nitrogen use efficiency.The Plant journal : for cell and molecular biology · 2024Article
- Comprehensive Genome-Wide Natural Variation and Expression Analysis of Tubby-like Proteins Gene Family inPlants (Basel, Switzerland) · 2024Article
- Comprehensive analysis of transcription factor binding sites and expression profiling of rice pathogenesis related genes (Frontiers in plant science · 2024Article
- A stress-inducible protein regulates drought tolerance and flowering time in Brachypodium and Arabidopsis.Plant physiology · 2023Article
- Tissue-specific transcriptome responses to Fusarium head blight and Fusarium root rot.Frontiers in plant science · 2022Article
- Transcriptome analysis of resistance mechanism to potato wart disease.Open life sciences · 2021Article
- Overexpression of a Cytochrome P450 Monooxygenase Involved in Orobanchol Biosynthesis Increases Susceptibility to Fusarium Head Blight.Frontiers in plant science · 2021Article
- The Role ofCells · 2020Article
- Constitutive Overexpression ofPlant physiology · 2020Article
- Genome-wide survey and expression analysis of calcium-dependent protein kinase (CDPK) in grass Brachypodium distachyon.BMC genomics · 2020Article
- Gibberellin Signaling Is Required for Far-Red Light-Induced Shoot Elongation inPlant physiology · 2020Article
- Abscisic acid is a substrate of the ABC transporter encoded by the durable wheat disease resistance gene Lr34.The New phytologist · 2019Article
- Transcriptional reference map of hormone responses in wheat spikes.BMC genomics · 2019Article
- The cereal pathogen Fusarium pseudograminearum produces a new class of active cytokinins during infection.Molecular plant pathology · 2018Article
- Brachypodium distachyon as alternative model host system for the ergot fungus Claviceps purpurea.Molecular plant pathology · 2018Article
- Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat.Scientific reports · 2017Article
- Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon.BMC genomics · 2017Article
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Brachypodium distachyon is a new model plant closely related to wheat and other cereals. In this study, we performed a comprehensive analysis of hormone-regulated genes in Brachypodium distachyon using RNA sequencing technology. Brachypodium distachyon seedlings were treated with eight phytohormones (auxin, cytokinine, brassinosteroid, gibberelline, abscisic acid, ethylene, jasmonate and salicylic acid) and two inhibitors, Brz220 (brassinosteroid biosynthesis inhibitor) and prohexadione (gibberelline biosynthesis inhibitor). The expressions of 1807 genes were regulated in a phytohormone-dependent manner. We compared the data with the phytohormone responses that have reported in rice. Transcriptional responses to hormones are conserved between Bracypodium and rice. Transcriptional regulation by brassinosteroid, gibberellin and ethylene was relatively weaker than those by other hormones. This is consistent with the data obtained from comprehensive analysis of hormone responses reported in Arabidopsis. Brachypodium and Arabidopsis also shared some common transcriptional responses to phytohormones. Alternatively, unique transcriptional responses to phytohormones were observed in Brachypodium. For example, the expressions of ACC synthase genes were up-regulated by auxin treatment in rice and Arabidopsis, but no orthologous ACC synthase gene was up-regulated in Brachypodium. Our results provide information useful to understand the diversity and similarity of hormone-regulated transcriptional responses between eudicots and monocots.
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