Evidence map›Paper›PMID 26418593›Full record

ArticlePloS one2015

Molecular Characterization of LjABCG1, an ATP-Binding Cassette Protein in Lotus japonicus.

Akifumi Sugiyama, Shoju Fukuda, Kojiro Takanashi, Miki Yoshioka, Hirofumi Yoshioka, Yoshihiro Narusaka, Mari Narusaka, Mikiko Kojima, Hitoshi Sakakibara, Nobukazu Shitan and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. The putative ABCG transporterPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Akifumi SugiyamaLaboratory of Plant Gene Expression, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, 611-0011, Japan.
Shoju FukudaLaboratory of Plant Gene Expression, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, 611-0011, Japan.
Kojiro TakanashiLaboratory of Plant Gene Expression, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, 611-0011, Japan.
Miki YoshiokaLaboratory of Defense in Plant-Pathogen Interactions, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan.
Hirofumi YoshiokaLaboratory of Defense in Plant-Pathogen Interactions, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan.
Yoshihiro NarusakaResearch Institute for Biological Sciences, Okayama, 7549-1, Yoshikawa, Kaga-gun, Okayama, 716-1241, Japan.
Mari NarusakaResearch Institute for Biological Sciences, Okayama, 7549-1, Yoshikawa, Kaga-gun, Okayama, 716-1241, Japan.
Mikiko KojimaRIKEN Center for Sustainable Resource Science, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan.
Hitoshi SakakibaraRIKEN Center for Sustainable Resource Science, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan.
Nobukazu ShitanLaboratory of Natural Medicinal Chemistry, Kobe Pharmaceutical University, Kobe, 658-8558, Japan.
Shusei SatoGraduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 980-8577, Japan; Kazusa DNA Research Institute, 2-6-7, Kazusa-Kamatari, Kisarazu, Chiba, 292-0812, Japan.
Satoshi TabataKazusa DNA Research Institute, 2-6-7, Kazusa-Kamatari, Kisarazu, Chiba, 292-0812, Japan.
Masayoshi KawaguchiNational Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki, 444-8585, Japan.
Kazufumi YazakiLaboratory of Plant Gene Expression, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, 611-0011, Japan.
Kyoto University · JPNagoya University · JPRIKEN Center for Sustainable Resource Science · JPKazusa DNA Research Institute · JPKobe Pharmaceutical University · JPNational Institute for Basic Biology · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LjABCG1, a full-size ABCG subfamily of ATP-binding cassette proteins of a model legume, Lotus japonicus, was reported as a gene highly expressed during the early stages of nodulation, but have not been characterized in detail. In this study we showed that the induction of LjABCG1 expression was remarkable by methyl jasmonate treatment, and reporter gene experiments indicated that LjABCG1 was strongly expressed in the nodule parenchyma and cell layers adjacent to the root vascular tissue toward the nodule. LjABCG1 was suggested to be localized at the plasma membrane based on the fractionation of microsomal membranes as well as separation via aqueous two-phase partitioning. The physiological functions of LjABCG1 in symbiosis and pathogenesis were analyzed in homologous and heterologous systems. LjABCG1 knock-down L. japonicus plants did not show clear phenotypic differences in nodule formation, and not in defense against Pseudomonas syringae, either. In contrast, when LjABCG1 was expressed in the Arabidopsis pdr8-1 mutant, the penetration frequency of Phytophthora infestans, a potato late blight pathogen, was significantly reduced in LjABCG1/pdr8-1 than in pdr8-1 plants. This finding indicated that LjABCG1, at least partially, complemented the phenotype of pdr8 in Arabidopsis, suggesting the multiple roles of this protein in plant-microbe interactions.

Indexed as

ArabidopsisATP-Binding Cassette TransportersCloning, MolecularGene Expression Regulation, PlantGenes, PlantLotusPlant DiseasesPlant ProteinsPlant RootsPromoter Regions, GeneticPseudomonas syringaeRNA InterferenceRNA, Small InterferingSymbiosisATP-Binding Cassette TransportersPDR8 protein, ArabidopsisPlant ProteinsRNA, Small Interfering

Identifiers

PMID26418593
PMCPMC4587964
OpenAlexW2275409316

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.