Evidence map›Paper›PMID 26416963›Full record

ArticleThe Journal of cell biology2015

PDK2-mediated alternative splicing switches Bnip3 from cell death to cell survival.

Hongying Gang, Rimpy Dhingra, Junjun Lin, Yan Hai, Yaron Aviv, Victoria Margulets, Mohammad Hamedani, Thatchawan Thanasupawat, Etienne Leygue, Thomas Klonisch and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Mitochondrial proteome research: the road ahead.Nature reviews. Molecular cell biology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Hypoxia-induced alternative splicing: the 11th Hallmark of Cancer.Journal of experimental & clinical cancer research : CR · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The impact of non-genetic heterogeneity on cancer cell death.Critical reviews in biochemistry and molecular biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Hongying GangDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Rimpy DhingraDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Junjun LinDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Yan HaiDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Yaron AvivDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Victoria MarguletsDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Mohammad HamedaniDepartment of Biochemistry and Medical Genetics, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Thatchawan ThanasupawatDepartment of Anatomy and Cell Science, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Etienne LeygueDepartment of Biochemistry and Medical Genetics, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Thomas KlonischDepartment of Anatomy and Cell Science, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
James R DavieManitoba Institute for Child Health, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6.
Lorrie A KirshenbaumDepartment of Physiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Department of Pathophysiology, The Institute of Cardiovascular Sciences, St. Boniface Hospital Research Centre, College of Medicine, Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R2H 2A6 Lorrie@sbrc.ca.
University of Manitoba · CASt. Boniface Hospital · CAChildren's Hospital Research Institute of Manitoba · CA

Funding

Canadian Institutes of Health Research MOP244369Canadian Institutes of Health Research MOP42402Canadian Institutes of Health Research MOP74456
6 · The paper itself

Abstract

Herein we describe a novel survival pathway that operationally links alternative pre-mRNA splicing of the hypoxia-inducible death protein Bcl-2 19-kD interacting protein 3 (Bnip3) to the unique glycolytic phenotype in cancer cells. While a full-length Bnip3 protein (Bnip3FL) encoded by exons 1-6 was expressed as an isoform in normal cells and promoted cell death, a truncated spliced variant of Bnip3 mRNA deleted for exon 3 (Bnip3Δex3) was preferentially expressed in several human adenocarcinomas and promoted survival. Reciprocal inhibition of the Bnip3Δex3/Bnip3FL isoform ratio by inhibiting pyruvate dehydrogenase kinase isoform 2 (PDK2) in Panc-1 cells rapidly induced mitochondrial perturbations and cell death. The findings of the present study reveal a novel survival pathway that functionally couples the unique glycolytic phenotype in cancer cells to hypoxia resistance via a PDK2-dependent mechanism that switches Bnip3 from cell death to survival. Discovery of the survival Bnip3Δex3 isoform may fundamentally explain how certain cells resist Bnip3 and avert death during hypoxia.

Indexed as

Alternative SplicingCell DeathCell HypoxiaCell SurvivalExonsHumansMCF-7 CellsMembrane ProteinsProtein Serine-Threonine KinasesProto-Oncogene ProteinsPyruvate Dehydrogenase Acetyl-Transferring KinaseBNIP3 protein, humanMembrane ProteinsPDK2 protein, humanProtein Serine-Threonine KinasesProto-Oncogene ProteinsPyruvate Dehydrogenase Acetyl-Transferring Kinase

Identifiers

PMID26416963
PMCPMC4586742
OpenAlexW2176183664

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.