Evidence map›Paper›PMID 26416734›Full record

ArticleNature2015

HIV-1 Nef promotes infection by excluding SERINC5 from virion incorporation.

Annachiara Rosa, Ajit Chande, Serena Ziglio, Veronica De Sanctis, Roberto Bertorelli, Shih Lin Goh, Sean M McCauley, Anetta Nowosielska, Stylianos E Antonarakis, Jeremy Luban and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 308 papers.

0numbers the graph read from it
0cells of the map it votes in
308citing papers in PubMed
21.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

308 citing papers in PubMed, 452 citations in OpenAlex.

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248 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Annachiara RosaUniversity of Trento, Centre for Integrative Biology, 38123 Trento, Italy.
Ajit ChandeUniversity of Trento, Centre for Integrative Biology, 38123 Trento, Italy.
Serena ZiglioUniversity of Trento, Centre for Integrative Biology, 38123 Trento, Italy.
Veronica De SanctisUniversity of Trento, Laboratory of Biomolecular Sequence and Structure Analysis for Health, NGS facility, 38123 Trento, Italy.
Roberto BertorelliUniversity of Trento, Laboratory of Biomolecular Sequence and Structure Analysis for Health, NGS facility, 38123 Trento, Italy.
Shih Lin GohUniversity of Massachusetts Medical School, Program in Molecular Medicine, Worcester, Massachusetts 01605, USA.
Sean M McCauleyUniversity of Massachusetts Medical School, Program in Molecular Medicine, Worcester, Massachusetts 01605, USA.
Anetta NowosielskaUniversity of Massachusetts Medical School, Program in Molecular Medicine, Worcester, Massachusetts 01605, USA.
Stylianos E AntonarakisUniversity of Geneva, Department of Genetic Medicine and Development, Geneva 1211, Switzerland.
Jeremy LubanUniversity of Massachusetts Medical School, Program in Molecular Medicine, Worcester, Massachusetts 01605, USA.
Federico Andrea SantoniUniversity of Geneva, Department of Genetic Medicine and Development, Geneva 1211, Switzerland.
Massimo PizzatoUniversity of Trento, Centre for Integrative Biology, 38123 Trento, Italy.
University of Trento · ITUniversity of Massachusetts Chan Medical School · USUniversity of Geneva · CH

Funding

Human Genes that Influence HIV-1 Replication, Pathogenesis, and Immunity in IVDUsDP1DA034990 · NIDA · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUBAN, JEREMY · 2012 to 2016
$4.1M
European Research Council 249968NIDA NIH HHS DP1 DA034990NIDA NIH HHS DP1DA034990
6 · The paper itself

Abstract

HIV-1 Nef, a protein important for the development of AIDS, has well-characterized effects on host membrane trafficking and receptor downregulation. By an unidentified mechanism, Nef increases the intrinsic infectivity of HIV-1 virions in a host-cell-dependent manner. Here we identify the host transmembrane protein SERINC5, and to a lesser extent SERINC3, as a potent inhibitor of HIV-1 particle infectivity that is counteracted by Nef. SERINC5 localizes to the plasma membrane, where it is efficiently incorporated into budding HIV-1 virions and impairs subsequent virion penetration of susceptible target cells. Nef redirects SERINC5 to a Rab7-positive endosomal compartment and thereby excludes it from HIV-1 particles. The ability to counteract SERINC5 was conserved in Nef encoded by diverse primate immunodeficiency viruses, as well as in the structurally unrelated glycosylated Gag from murine leukaemia virus. These examples of functional conservation and convergent evolution emphasize the fundamental importance of SERINC5 as a potent anti-retroviral factor.

Indexed as

Host-Pathogen InteractionsAnimalsCell LineCell MembraneEndosomesEvolution, MolecularGene Products, gagGene Products, nefHIV-1Host SpecificityHumansLeukemia Virus, MurineMembrane GlycoproteinsMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusNeoplasm ProteinsGene Products, gagGene Products, nefMembrane GlycoproteinsMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusNeoplasm Proteinsrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, humanrab GTP-Binding ProteinsReceptors, Cell SurfaceSERINC3 protein, humanSERINC5 protein, human

Identifiers

PMID26416734
PMCPMC4861059
OpenAlexW1933898011

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.