Evidence map›Paper›PMID 26416668›Full record

ArticleG3 (Bethesda, Md.)2015

Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi.

Laura H Okagaki, Cristiano C Nunes, Joshua Sailsbery, Brent Clay, Doug Brown, Titus John, Yeonyee Oh, Nelson Young, Michael Fitzgerald, Brian J Haas and 12 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  4. Genome sequence of a EuropeanFrontiers in plant science · 2024
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  5. The Devastating Rice Blast Airborne PathogenPathogens (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Laura H OkagakiCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606.
Cristiano C NunesCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606.
Joshua SailsberyCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606.
Brent ClayCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606.
Doug BrownCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606.
Titus JohnCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606.
Yeonyee OhCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606.
Nelson YoungDepartment of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, Massachusetts 01003.
Michael FitzgeraldThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Brian J HaasThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Qiandong ZengThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Sarah YoungThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Xian AdiconisThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Lin FanThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Joshua Z LevinThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Thomas K MitchellDepartment of Plant Pathology, Ohio State University, Columbus, Ohio 43210.
Patricia A OkubaraUSDA-ARS, Root Disease and Biological Control, Pullman, Washington 99164.
Mark L FarmanDepartment of Plant Pathology, University of Kentucky, Lexington, Kentucky 40546.
Linda M KohnDepartment of Biology, University of Toronto, Mississauga, Toronto, Ontario, L5L 1C6, Canada.
Bruce BirrenThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Li-Jun MaDepartment of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, Massachusetts 01003 radean2@ncsu.edu lijun@biochem.umass.edu.
Ralph A DeanCenter for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606 radean2@ncsu.edu lijun@biochem.umass.edu.
North Carolina State University · USBroad Institute · USThe Ohio State University · USUniversity of Kentucky · USUniversity of Massachusetts Amherst · USUniversity of Toronto · CA

Funding

Viral Genomics: evolution, spread, and host interactionsU19AI110818 · NIAID · BROAD INSTITUTE, INC. · PI NEAFSEY, DANIEL E · 2014 to 2024
$66.5M
Tri-Institutional Molecular Mycology and Pathogenesis Training ProgramT32AI052080 · NIAID · DUKE UNIVERSITY · PI ANDREW ALSPAUGH, JOSEPH HEITMAN · 2003 to 2026
$8.7M
NIAID NIH HHS 5T32-AI052080-09NIAID NIH HHS T32 AI052080NIAID NIH HHS U19 AI110818
6 · The paper itself

Abstract

Magnaporthaceae is a family of ascomycetes that includes three fungi of great economic importance: Magnaporthe oryzae, Gaeumannomyces graminis var. tritici, and Magnaporthe poae. These three fungi cause widespread disease and loss in cereal and grass crops, including rice blast disease (M. oryzae), take-all disease in wheat and other grasses (G. graminis), and summer patch disease in turf grasses (M. poae). Here, we present the finished genome sequence for M. oryzae and draft sequences for M. poae and G. graminis var. tritici. We used multiple technologies to sequence and annotate the genomes of M. oryzae, M. poae, and G. graminis var. tritici. The M. oryzae genome is now finished to seven chromosomes whereas M. poae and G. graminis var. tritici are sequenced to 40.0× and 25.0× coverage respectively. Gene models were developed by the use of multiple computational techniques and further supported by RNAseq data. In addition, we performed preliminary analysis of genome architecture and repetitive element DNA.

Indexed as

Genome, FungalGenomicsHigh-Throughput Nucleotide SequencingAscomycotaComputational BiologyMolecular Sequence AnnotationPlant DiseasesRepetitive Sequences, Nucleic AcidSequence Analysis, DNATriticumGaeumannomycesMagnaportherepetitive DNAsequencesynteny

Identifiers

PMID26416668
PMCPMC4683626
OpenAlexW2260738652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.