Evidence map›Paper›PMID 26411727›Full record

ArticlePlanta2016

Multiple mechanism confers natural tolerance of three lilyturf species to glyphosate.

Chanjuan Mao, Hongjie Xie, Shiguo Chen, Bernal E Valverde, Sheng Qiang

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Evolution of Glyphosate-Resistant Weeds.Reviews of environmental contamination and toxicology · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. IdentifyingFrontiers in plant science · 2017
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Chanjuan MaoWeed Research Laboratory, Nanjing Agricultural University, Nanjing, 210095, China.
Hongjie XieWeed Research Laboratory, Nanjing Agricultural University, Nanjing, 210095, China.
Shiguo ChenWeed Research Laboratory, Nanjing Agricultural University, Nanjing, 210095, China.
Bernal E ValverdeWeed Research Laboratory, Nanjing Agricultural University, Nanjing, 210095, China.
Sheng QiangWeed Research Laboratory, Nanjing Agricultural University, Nanjing, 210095, China. wrl@njau.edu.cn.
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionA combination of unique EPSPS structure and increased gene copy number and expression contribute to natural glyphosate tolerance in three lilyturf species. A few plants are naturally tolerant to glyphosate, the most widely used non-selective herbicide worldwide. Here, the basis for natural tolerance to glyphosate in three lilyturf species, Ophiopogon japonicus (OJ), Liriope spicata (LS), and Liriope platyphylla (LP), is characterized. These species tolerate glyphosate at about five times the commercially recommended field dose. They share three unique amino acids in their 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) that affect glyphosate binding. These correspond to Asp71Met, Ala112Ile, and Val201Met amino acid variations compared to 231 other published plant EPSPS amino acid sequences. There was also a common deletion at 91 of a highly conserved glutamic acid. Glyphosate-treated lilyturf plants accumulated little shikimic acid but had significantly higher levels of EPSPS mRNA than initially expressed in the control. The IC50 of LsEPSPS was 14.0 µM compared to the 5.1 µM of Arabidopsis thaliana. The higher K m and K i values of LsEPSPS kinetics showed that LsEPSPS had lower substrate binding affinity to glyphosate. Overexpression of LsEPSPS in the recombinant E. coli BL21 (DE3) strain enhanced its tolerance to glyphosate. Both OJ and LS had two copies of the EPSPS gene, while LP had three copies. Therefore, a combination of unique EPSPS structure and increased gene copy number and expression contribute to natural glyphosate tolerance in the three lilyturf species.

Indexed as

3-Phosphoshikimate 1-CarboxyvinyltransferaseAmino Acid SequenceAmino Acid SubstitutionBinding SitesCloning, MolecularGlycineGlyphosateHerbicide ResistanceLiriope PlantModels, MolecularMolecular Sequence DataOphiopogonPlant ProteinsProtein Structure, TertiaryRNA, MessengerSequence Alignment3-Phosphoshikimate 1-CarboxyvinyltransferaseGlycineGlyphosatePlant ProteinsRNA, MessengerEPSPS geneGlyphosateLilyturfShikimic acidTolerance mechanism

Identifiers

PMID26411727
OpenAlexW2182916513

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.