Evidence map›Paper›PMID 26410082›Full record

ArticleCancer discovery2015

Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets.

Priscilla K Brastianos, Scott L Carter, Sandro Santagata, Daniel P Cahill, Amaro Taylor-Weiner, Robert T Jones, Eliezer M Van Allen, Michael S Lawrence, Peleg M Horowitz, Kristian Cibulskis and 34 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer discovery, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 639 papers.

0numbers the graph read from it
0cells of the map it votes in
639citing papers in PubMed
63.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

639 citing papers in PubMed, 1,114 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Reirradiation of recurrent brain tumors: a review by the ESTRO CNS Focus Group.Clinical and translational radiation oncology · 2027
    Review
  4. Article
  5. Article
  6. Article
  7. Brain metastasis: Opportunities for novel therapies.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2026
    Review
  8. Article
  9. Review
  10. Review
  11. Current oncology (Toronto, Ont.) · 2026
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Focused ultrasound for brain metastases.Neuro-oncology advances · 2026
    Review
  19. Article
  20. Review

579 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 2 institutions in 1 country.

Priscilla K Brastianos *Department of Medicine, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Scott L Carter *Joint Center for Cancer Precision Medicine, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Sandro SantagataDepartment of Cancer Biology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Daniel P CahillDepartment of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Amaro Taylor-WeinerBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Robert T JonesDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Eliezer M Van AllenDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Michael S LawrenceBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Peleg M HorowitzDepartment of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Kristian CibulskisBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Keith L LigonDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Josep TaberneroDepartment of Medical Oncology, Department of Pathology, Barcelona - all in Spain.
Joan SeoaneDepartment of Medical Oncology, Department of Pathology, Barcelona - all in Spain.
Elena Martinez-SaezVall d'Hebron University Hospital and Institute of Oncology (VHIO), Barcelona - all in Spain.
William T CurryDepartment of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Ian F DunnDepartment of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Sun Ha PaekDepartment of Neurosurgery and Department of Pathology, Seoul National University College of Medicine - all in Korea.
Sung-Hye ParkDepartment of Neurosurgery and Department of Pathology, Seoul National University College of Medicine - all in Korea.
Aaron McKennaBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Aaron ChevalierBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Mara RosenbergBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Frederick G BarkerDepartment of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Corey M GillCancer Center, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Paul Van HummelenDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Aaron R ThornerDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Bruce E JohnsonDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Mai P HoangDepartment of Pathology, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Toni K ChoueiriDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Sabina SignorettiDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Carrie SougnezBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Michael S RabinDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Nancy U LinDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Eric P WinerDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Anat Stemmer-RachamimovDepartment of Pathology, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Matthew MeyersonDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Levi GarrawayDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Stacey GabrielBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Eric S LanderBroad Institute, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Rameen BeroukhimDepartment of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Tracy T BatchelorDepartment of Neurology, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Jose BaselgaDepartment of Medicine, Memorial Sloan-Kettering Cancer Center, New York City.
David N LouisDepartment of Pathology, Massachusetts General Hospital, Harvard Medical School, all in Boston.
Gad Getz *Department of Pathology, Massachusetts General Hospital, Harvard Medical School, all in Boston.
William C Hahn *Department of Medical Oncology, Brigham and Women's Hospital, Harvard Medical School - all in Boston.
Dana-Farber Cancer Institute · USHarvard University · US

Funding

Large Scale Sequencing and Analysis of GenomesU54HG003067 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY, LANDER, ERIC S · 2004 to 2015
$568.6M
X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Targeting the Vasular SystemP50CA165962 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WENDY Beth LONDON · 2013 to 2026
$33.5M
Training Program in Nervous System TumorsK12CA090354 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI PLOTKIN, SCOTT R · 2001 to 2025
$16.3M
The Cell-Of-Origin of Human CancersU54CA143798 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI MICHOR, FRANZISKA · 2009 to 2014
$11.2M
Therapeutic Opportunities for Pediatric AstrocytomaP01CA142536 · NCI · DANA-FARBER CANCER INST · PI SEGAL, ROSALIND A. · 2011 to 2015
$7.9M
Clinical and Molecular Studies of Novel Therapeutics in Malignant Brain TumorsK24CA125440 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI BATCHELOR, TRACY T · 2007 to 2016
$1.9M
NCI NIH HHS 5U24CA143687NCI NIH HHS K12 CA090354NCI NIH HHS U54 CA143798NCI NIH HHS U54CA143798NHGRI NIH HHS U54 HG003067
6 · The paper itself

Abstract

unlabelledBrain metastases are associated with a dismal prognosis. Whether brain metastases harbor distinct genetic alterations beyond those observed in primary tumors is unknown. We performed whole-exome sequencing of 86 matched brain metastases, primary tumors, and normal tissue. In all clonally related cancer samples, we observed branched evolution, where all metastatic and primary sites shared a common ancestor yet continued to evolve independently. In 53% of cases, we found potentially clinically informative alterations in the brain metastases not detected in the matched primary-tumor sample. In contrast, spatially and temporally separated brain metastasis sites were genetically homogenous. Distal extracranial and regional lymph node metastases were highly divergent from brain metastases. We detected alterations associated with sensitivity to PI3K/AKT/mTOR, CDK, and HER2/EGFR inhibitors in the brain metastases. Genomic analysis of brain metastases provides an opportunity to identify potentially clinically informative alterations not detected in clinically sampled primary tumors, regional lymph nodes, or extracranial metastases. SIGNIFICANCE: Decisions for individualized therapies in patients with brain metastasis are often made from primary-tumor biopsies. We demonstrate that clinically actionable alterations present in brain metastases are frequently not detected in primary biopsies, suggesting that sequencing of primary biopsies alone may miss a substantial number of opportunities for targeted therapy.

Indexed as

Brain NeoplasmsCluster AnalysisDisease ProgressionDrug Resistance, NeoplasmExomeGenetic HeterogeneityGenetic VariationGenome-Wide Association StudyHigh-Throughput Nucleotide SequencingHumansLymph NodesMolecular Targeted TherapyMutationNeoplasmsSignal Transduction

Identifiers

PMID26410082
PMCPMC4916970
OpenAlexW2175940415

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.