Evidence map›Paper›PMID 26408188›Full record

ArticlePediatric nephrology (Berlin, Germany)2016

Rare variants in tenascin genes in a cohort of children with primary vesicoureteric reflux.

Shan Elahi, Alison Homstad, Himani Vaidya, Jennifer Stout, Gentzon Hall, Guanghong Wu, Peter Conlon, Jonathan C Routh, John S Wiener, Sherry S Ross and 8 more

Open access · greenAbstract read
In one paragraph

Article in Pediatric nephrology (Berlin, Germany), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Children with vesicoureteric reflux have joint hypermobility and occasional tenascin XB sequence variants.Canadian Urological Association journal = Journal de l'Association des urologues du Canada · 2020
    Article
  4. Article
  5. Review
  6. Vesicoureteral reflux and the extracellular matrix connection.Pediatric nephrology (Berlin, Germany) · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 2 countries.

Shan ElahiDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Alison HomstadDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Himani VaidyaDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Jennifer StoutDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Gentzon HallDuke Molecular Physiology Institute, Durham, NC, USA.
Guanghong WuDuke Molecular Physiology Institute, Durham, NC, USA.
Peter ConlonDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Jonathan C RouthDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
John S WienerDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Sherry S RossDepartment of Surgery, Division of Urology, Duke University Medical Center, Durham, NC, USA.
Shashi NagarajDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Delbert WigfallDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
John ForemanDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Adebowale AdeyemoCenter for Research on Genomics and Global Health, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, 20892-5635, USA.
Indra R GuptaDepartment of Pediatrics and Human Genetics, McGill University, Montreal, QC, Canada.
Patrick D BrophyDepartment of Pediatrics, University of Iowa, Iowa City, Iowa, USA.
C Egla RabinovichDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
Rasheed A GbadegesinDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA. rasheed.gbadegesin@duke.edu.
Duke Medical Center · USDuke University Hospital · USMcGill University · CANational Institutes of Health · USUniversity of Iowa · USUniversity of North Carolina at Chapel Hill · US

Funding

IDENTIFICATION OF VUR GENES BY COMBINED LINKAGE ANALYSIS AND EXOME SEQUENCINGR21DK096200 · NIDDK · DUKE UNIVERSITY · PI GBADEGESIN, RASHEED ADEBAYO · 2013 to 2014
$429k
NIDDK NIH HHS R21 DK096200NIDDK NIH HHS R21DK096200
6 · The paper itself

Abstract

backgroundPrimary vesicoureteral reflux (PVUR) is the most common malformation of the kidney and urinary tract, and reflux nephropathy is a major cause of chronic kidney disease in children. Recently, we reported mutations in the tenascin XB gene (TNXB) as a cause of PVUR with joint hypermobility.

methodsTo define the role of rare variants in tenascin genes in the etiology of PVUR, we screened a cohort of patients with familial PVUR (FPVUR) and non-familial PVUR (NFPVUR) for rare missense variants inTNXB and the tenascin C gene (TNC) after excluding mutations in ROBO2 and SOX17.

resultsThe screening procedure identified 134 individuals from 112 families with PVUR; two families with mutations in ROBO2 were excluded from further analysis. Rare missense variants in TNXB were found in the remaining 110 families, of which 5/55 (9%) families had FPVUR and 2/55 (4%) had NFPVUR. There were no differences in high-grade reflux or renal parenchymal scarring between patients with and without TNXB variants. All patients with TNXB rare variants who were tested exhibited joint hypermobility. Overall we were able to identify causes of FPVUR in 7/57 (12%) families (9% in TNXB and 3% in ROBO2).

conclusionsIn conclusion, the identification of a rare missense variant in TNXB in combination with a positive family history of VUR and joint hypermobility may represent a non-invasive method to diagnose PVUR and warrants further evaluation in other cohorts.

Indexed as

Mutation, MissenseChildChild, PreschoolFemaleHumansInfantJoint InstabilityMaleMutationPedigreeTenascinVesico-Ureteral RefluxTenascinJoint hypermobilityReflux nephropathyTenascin genesUrinary tract infectionVesicoureteral reflux

Identifiers

PMID26408188
PMCPMC4747108
OpenAlexW2146143211

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.