Evidence map›Paper›PMID 26408088›Full record

ArticleActa veterinaria Scandinavica2015

Rapid detection of Salmonella enterica serovar Typhimurium DT104 strains by the polymerase chain reaction.

Shoichiro Yukawa, Yutaka Tamura, Kiyoshi Tanaka, Ikuo Uchida

Abstract read
In one paragraph

Article in Acta veterinaria Scandinavica, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Complete genome sequence of multi-drug-resistantMicrobiology resource announcements · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shoichiro YukawaDepartment of Comparative Animal Science, College of Life Science, Kurashiki University of Science and The Arts, 2640 Tsurajimachou Nisinoura, Kurashiki-shi, Okayama, 712-8505, Japan. yukawa@sci.kusa.ac.jp.
Yutaka TamuraDepartment of Veterinary Medicine, School of Veterinary Medicine, Rakuno Gakuen University, 582 Bunkyoudaimidorimachi, Ebetsu-shi, Hokkaido, 069-8501, Japan. tamuray@rakuno.ac.jp.
Kiyoshi TanakaHokkaido Research Station, National Institute of Animal Health, 4 Hitsujigaoka, Toyohira, Sapporo, 062-0045, Japan. kiyochan@affrc.go.jp.
Ikuo UchidaHokkaido Research Station, National Institute of Animal Health, 4 Hitsujigaoka, Toyohira, Sapporo, 062-0045, Japan. ikuouchi@affrc.go.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInfection with Salmonella enterica is a major public health concern in developed countries, and multidrug-resistant strains have become increasingly prevalent. S. enterica serovar Typhimurium DT104 (DT104) strains are prevalent in livestock in Japan and include numerous strains of multidrug-resistant S. enterica. Epidemiological analysis of these strains is critical for both agriculture and public health; however, diagnostic tests for these strains have yielded inconsistent results.

resultsWe developed a rapid, simple, and inexpensive polymerase chain reaction test to detect multi-drug resistant DT104 strains. We designed primers specific to the prophage ST104 sequence encoded by DT104 strains and assessed the specificity of these primers by assaying a panel of 50 S. enterica isolates. Amplification products of the expected size were generated from the genomes of each of the DT104 strains; however, the ST104 primers failed to amplify products from non-DT104 strains of S. enterica serovar Typhimurium or other S. enterica serovars. Furthermore, a probe generated using the ST104 primers detected a restriction fragment encoding the ST104 region of DT104 by Southern hybridization.

conclusionsThe ST104 primers exhibit specificity to DT104 strains and are suitable for epidemiological applications.

Indexed as

Drug Resistance, Multiple, BacterialAnimalsAnti-Infective AgentsCattleCattle DiseasesJapanPolymerase Chain ReactionSalmonella Infections, AnimalSalmonella typhimuriumAnti-Infective Agents

Identifiers

PMID26408088
PMCPMC4583067

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.