Evidence map›Paper›PMID 26406247›Full record

ArticlePloS one2015

Development of Gateway Binary Vector Series with Four Different Selection Markers for the Liverwort Marchantia polymorpha.

Kimitsune Ishizaki, Ryuichi Nishihama, Minoru Ueda, Keisuke Inoue, Sakiko Ishida, Yoshiki Nishimura, Toshiharu Shikanai, Takayuki Kohchi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 133 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
133citing papers in PubMed, 1 pooled it
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

133 citing papers in PubMed, 1 synthesis or guideline pooled it, 314 citations in OpenAlex.

  1. Pooled it
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  7. Spatial organization of plant defense at the infection front.bioRxiv : the preprint server for biology · 2026
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73 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Kimitsune IshizakiGraduate School of Biostudies, Kyoto University, Kyoto, Japan; Graduate School of Science, Kobe University, Kobe, Japan.
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Minoru UedaDepartment of Botany, Graduate School of Science, Kyoto University, Kyoto, Japan.
Keisuke InoueGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Sakiko IshidaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Yoshiki NishimuraDepartment of Botany, Graduate School of Science, Kyoto University, Kyoto, Japan.
Toshiharu ShikanaiDepartment of Botany, Graduate School of Science, Kyoto University, Kyoto, Japan.
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We previously reported Agrobacterium-mediated transformation methods for the liverwort Marchantia polymorpha using the hygromycin phosphotransferase gene as a marker for selection with hygromycin. In this study, we developed three additional markers for M. polymorpha transformation: the gentamicin 3'-acetyltransferase gene for selection with gentamicin; a mutated acetolactate synthase gene for selection with chlorsulfuron; and the neomycin phosphotransferase II gene for selection with G418. Based on these four marker genes, we have constructed a series of Gateway binary vectors designed for transgenic experiments on M. polymorpha. The 35S promoter from cauliflower mosaic virus and endogenous promoters for constitutive and heat-inducible expression were used to create these vectors. The reporters and tags used were Citrine, 3×Citrine, Citrine-NLS, TagRFP, tdTomato, tdTomato-NLS, GR, SRDX, SRDX-GR, GUS, ELuc(PEST), and 3×FLAG. These vectors, designated as the pMpGWB series, will facilitate molecular genetic analyses of the emerging model plant M. polymorpha.

Indexed as

Acetolactate SynthaseAcetyltransferasesAgrobacterium tumefaciensBacterial ProteinsGenetic MarkersGenetic VectorsGentamicinsKanamycin KinaseMarchantiaPlants, Genetically ModifiedSulfonamidesTransfectionTriazinesAcetolactate SynthaseAcetyltransferasesantibiotic G 418Bacterial ProteinschlorsulfuronGenetic Markersgentamicin 3-acetyltransferaseGentamicinsKanamycin KinaseSulfonamidesTriazines

Identifiers

PMID26406247
PMCPMC4583185
OpenAlexW2338721912

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.