Evidence map›Paper›PMID 26404089›Full record

ArticleNature communications2015

An Arabidopsis PWI and RRM motif-containing protein is critical for pre-mRNA splicing and ABA responses.

Xiangqiang Zhan, Bilian Qian, Fengqiu Cao, Wenwu Wu, Lan Yang, Qingmei Guan, Xianbin Gu, Pengcheng Wang, Temiloluwa A Okusolubo, Stephanie L Dunn and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 1 pooled it
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

  1. Pooled it
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  17. Alternative Splicing during Fiber Development inInternational journal of molecular sciences · 2023
    Article
  18. Article
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  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Xiangqiang ZhanShanghai Center for Plant Stress Biology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
Bilian QianDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
Fengqiu CaoShanghai Center for Plant Stress Biology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
Wenwu WuShanghai Center for Plant Stress Biology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
Lan YangShanghai Center for Plant Stress Biology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
Qingmei GuanDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
Xianbin GuDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
Pengcheng WangDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907, USA.
Temiloluwa A OkusoluboDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
Stephanie L DunnDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
Jian-Kang ZhuShanghai Center for Plant Stress Biology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
Jianhua ZhuDepartment of Plant Science and Landscape Architecture, University of Maryland, 2121 Plant Sciences Building, College Park, Maryland 20742, USA.
University of Maryland, College Park · USChinese Academy of Sciences · CNShanghai Institutes for Biological Sciences · CNPurdue University West Lafayette · US

Funding

CALCIUM SIGNALING--INTRACELL ION HOMEOSTASIS REGULATIONR01GM059138 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI ZHU, JIAN-KANG · 1999 to 2015
$4.4M
NIGMS NIH HHS R01 GM059138NIGMS NIH HHS R01GM059138
6 · The paper itself

Abstract

The phytohormone abscisic acid (ABA) is important for growth, development and stress responses in plants. Recent research has identified ABA receptors and signalling components that regulate seed germination and stomatal closure. However, proteins that regulate ABA signalling remain poorly understood. Here we use a forward-genetic screen to identify rbm25-1 and rbm25-2, two Arabidopsis mutants with increased sensitivity to growth inhibition by ABA. Using RNA-seq, we found that RBM25 controls the splicing of many pre-mRNAs. The protein phosphatase 2C HAB1, a critical component in ABA signalling, shows a dramatic defect in pre-mRNA splicing in rbm25 mutants. Ectopic expression of a HAB1 complementary DNA derived from wild-type mRNAs partially suppresses the rbm25-2 mutant phenotype. We suggest that RNA splicing is of particular importance for plant response to ABA and that the splicing factor RBM25 has a critical role in this response.

Indexed as

Abscisic AcidAmino Acid MotifsArabidopsisArabidopsis ProteinsIsoleucineMutationPhosphoprotein PhosphatasesProlineReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA Recognition Motif ProteinsRNA SplicingSequence Analysis, RNATryptophanAbscisic AcidArabidopsis ProteinsHAB1 protein, ArabidopsisIsoleucinePhosphoprotein PhosphatasesProlineRNA, MessengerRNA Recognition Motif ProteinsTryptophan

Identifiers

PMID26404089
PMCPMC5514415
OpenAlexW2258330444

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.