Evidence map›Paper›PMID 26401596›Full record

ArticleMicrobial biotechnology2016

EpsA is an essential gene in exopolysaccharide production in Lactobacillus johnsonii FI9785.

Enes Dertli, Melinda J Mayer, Ian J Colquhoun, Arjan Narbad

Abstract read
In one paragraph

Article in Microbial biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Whole genome sequence ofFrontiers in microbiology · 2023
    Article
  4. Article
  5. Article
  6. Differentiation ofFoods (Basel, Switzerland) · 2021
    Article
  7. Assessment ofJournal of microbiology and biotechnology · 2021
    Article
  8. Virulence · 2020
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Interactions of Surface Exopolysaccharides FromFrontiers in microbiology · 2018
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Enes DertliDepartment of Gut Health and Food Safety, Institute of Food Research, Norwich, Colney, NR4 7UA, UK.
Melinda J MayerDepartment of Gut Health and Food Safety, Institute of Food Research, Norwich, Colney, NR4 7UA, UK.
Ian J ColquhounAnalytical Sciences Unit, Institute of Food Research, Norwich, Colney, NR4 7UA, UK.
Arjan NarbadDepartment of Gut Health and Food Safety, Institute of Food Research, Norwich, Colney, NR4 7UA, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/J004529/1Biotechnology and Biological Sciences Research Council BBS/E/F/00044453
6 · The paper itself

Abstract

Lactobacillus johnsonii FI9785 has an eps gene cluster which is required for the biosynthesis of homopolymeric exopolysaccharides (EPS)-1 and heteropolymeric EPS-2 as a capsular layer. The first gene of the cluster, epsA, is the putative transcriptional regulator. In this study we showed the crucial role of epsA in EPS biosynthesis by demonstrating that deletion of epsA resulted in complete loss of both EPS-1 and EPS-2 on the cell surface. Plasmid complementation of the epsA gene fully restored EPS production, as confirmed by transmission electron microscopy and nuclear magnetic resonance (NMR) analysis. Furthermore, this complementation resulted in a twofold increase in the expression levels of this gene, which almost doubled amounts of EPS production in comparison with the wild-type strain. Analysis of EPS by NMR showed an increased ratio of the heteropolysaccharide to homopolysaccharide in the complemented strain and allowed identification of the acetylated residue in EPS-2 as the (1,4)-linked βGlcp unit, with the acetyl group located at O-6. These findings indicate that epsA is a positive regulator of EPS production and that EPS production can be manipulated by altering its expression.

Indexed as

Genes, BacterialGenes, EssentialGene DeletionGenetic Complementation TestLactobacillus johnsoniiMagnetic Resonance SpectroscopyMicroscopy, Electron, TransmissionMultigene FamilyPolysaccharides, BacterialPolysaccharides, Bacterial

Identifiers

PMID26401596
PMCPMC4919991

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.