Evidence map›Paper›PMID 26399222›Full record

ArticleClinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology2016

Genetic associations with viral respiratory illnesses and asthma control in children.

D A Loisel, G Du, T S Ahluwalia, C J Tisler, M D Evans, R A Myers, R E Gangnon, E Kreiner-Møller, K Bønnelykke, H Bisgaard and 5 more

Abstract read
In one paragraph

Article in Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Viral Infection and Airway Epithelial Immunity in Asthma.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Up-Regulated Vitamin D Receptor byPharmaceuticals (Basel, Switzerland) · 2021
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. American journal of respiratory cell and molecular biology · 2019
    Article
  14. Rhinovirus and Asthma Exacerbations.Immunology and allergy clinics of North America · 2019
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. The puzzle of immune phenotypes of childhood asthma.Molecular and cellular pediatrics · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

D A LoiselDepartment of Human Genetics, University of Chicago, Chicago, IL, USA.
G DuDepartment of Human Genetics, University of Chicago, Chicago, IL, USA.
T S AhluwaliaCOPSAC, Copenhagen Prospective Studies on Asthma in Childhood, Herlev and Gentofte Hospital, University of Copenhagen, Ledreborg Allé 34, DK-2820, Copenhagen, Denmark.
C J TislerDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
M D EvansDepartment of Biostatistics and Medical Informatics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
R A MyersDepartment of Human Genetics, University of Chicago, Chicago, IL, USA.
R E GangnonDepartment of Biostatistics and Medical Informatics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
E Kreiner-MøllerCOPSAC, Copenhagen Prospective Studies on Asthma in Childhood, Herlev and Gentofte Hospital, University of Copenhagen, Ledreborg Allé 34, DK-2820, Copenhagen, Denmark.
K BønnelykkeCOPSAC, Copenhagen Prospective Studies on Asthma in Childhood, Herlev and Gentofte Hospital, University of Copenhagen, Ledreborg Allé 34, DK-2820, Copenhagen, Denmark.
H BisgaardCOPSAC, Copenhagen Prospective Studies on Asthma in Childhood, Herlev and Gentofte Hospital, University of Copenhagen, Ledreborg Allé 34, DK-2820, Copenhagen, Denmark.
D J JacksonDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
R F LemanskeDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
D L NicolaeDepartment of Human Genetics, University of Chicago, Chicago, IL, USA.
J E GernDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
C OberDepartment of Human Genetics, University of Chicago, Chicago, IL, USA.
University of Wisconsin–Madison · USUniversity of Chicago · USGentofte Hospital · DKCopenhagen Prospective Studies on Asthma in Childhood · DKSaint Michael's College · USUniversity of Copenhagen · DK

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
Virus-Bacterial Interactions and Exacerba of AsthmaP01HL070831 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI LEMANSKE, ROBERT F · 2002 to 2017
$31.3M
Wisconsin Infant Study Cohort (WISC)U19AI104317 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern, CHRISTINE Marie SEROOGY · 2013 to 2026
$22.5M
RESEARCH TRAINING IN RESPIRATORY BIOLOGYT32HL007605 · NHLBI · UNIVERSITY OF CHICAGO · PI Yun Fang, Gokhan M. Mutlu · 1985 to 2026
$18.1M
RV-Mediated Mechanisms of Neutrophil Motility /InflammatU19AI070503 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E. · 2006 to 2010
$6.8M
Sex-specific genetic architecture of asthma risk in childrenF32HL095268 · NHLBI · UNIVERSITY OF CHICAGO · PI LOISEL, DAGAN A. · 2009 to 2010
$77k
NCATS NIH HHS UL1 TR000427NCATS NIH HHS UL1TR000427NHLBI NIH HHS F32 HL095268NHLBI NIH HHS HHSN268201100037CNHLBI NIH HHS P01 HL070831NHLBI NIH HHS T32 HL007605NIAID NIH HHS U19 AI070503NIAID NIH HHS U19 AI104317PHS HHS HHSN268201100037C
6 · The paper itself

Abstract

backgroundViral respiratory infections can cause acute wheezing illnesses in children and exacerbations of asthma.

objectiveWe sought to identify variation in genes with known antiviral and pro-inflammatory functions to identify specific associations with more severe viral respiratory illnesses and the risk of virus-induced exacerbations during the peak fall season.

methodsThe associations between genetic variation at 326 SNPs in 63 candidate genes and 10 phenotypes related to viral respiratory infection and asthma control were examined in 226 children enrolled in the RhinoGen study. Replication of asthma control phenotypes was performed in 2128 children in the Copenhagen Prospective Study on Asthma in Childhood (COPSAC). Significant associations in RhinoGen were further validated using virus-induced wheezing illness and asthma phenotypes in an independent sample of 122 children enrolled in the Childhood Origins of Asthma (COAST) birth cohort study.

resultsA significant excess of P values smaller than 0.05 was observed in the analysis of the 10 RhinoGen phenotypes. Polymorphisms in 12 genes were significantly associated with variation in the four phenotypes showing a significant enrichment of small P values. Six of those genes (STAT4, JAK2, MX1, VDR, DDX58, and EIF2AK2) also showed significant associations with asthma exacerbations in the COPSAC study or with asthma or virus-induced wheezing phenotypes in the COAST study.

conclusionsWe identified genetic factors contributing to individual differences in childhood viral respiratory illnesses and virus-induced exacerbations of asthma. Defining mechanisms of these associations may provide insight into the pathogenesis of viral respiratory infections and virus-induced exacerbations of asthma.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAge FactorsAllelesAsthmaChildChild, PreschoolDisease ProgressionFemaleGenetic VariationGenotypeHumansMalePatient Outcome AssessmentPhenotypePolymorphism, Single Nucleotideallergic sensitizationasthmachildrencold symptomsgenetic associationhuman rhinovirusviral respiratory illnesswheezing

Identifiers

PMID26399222
PMCPMC4715666
OpenAlexW2160484041

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.