Evidence map›Paper›PMID 26396237›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2016

LRRK2 autophosphorylation enhances its GTPase activity.

Zhiyong Liu, James A Mobley, Lawrence J DeLucas, Richard A Kahn, Andrew B West

Open access · bronzeAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
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  7. Autophagy and Its Association with Genetic Mutations in Parkinson Disease.Medical science monitor : international medical journal of experimental and clinical research · 2022
    Review
  8. Exploring the focal role of LRRK2 kinase in Parkinson's disease.Environmental science and pollution research international · 2022
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Leucine Rich Repeat Kinase 2 and Innate Immunity.Frontiers in neuroscience · 2020
    Review
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zhiyong Liu*Center for Neurodegeneration and Experimental Therapeutics, Department of Neurology, Center for Structural Biology, Department of Optometry, and Department of Surgery, The University of Alabama at Birmingham, Birmingham, Alabama, USA; and Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
James A Mobley*Center for Neurodegeneration and Experimental Therapeutics, Department of Neurology, Center for Structural Biology, Department of Optometry, and Department of Surgery, The University of Alabama at Birmingham, Birmingham, Alabama, USA; and Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Lawrence J DeLucas*Center for Neurodegeneration and Experimental Therapeutics, Department of Neurology, Center for Structural Biology, Department of Optometry, and Department of Surgery, The University of Alabama at Birmingham, Birmingham, Alabama, USA; and Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Richard A Kahn*Center for Neurodegeneration and Experimental Therapeutics, Department of Neurology, Center for Structural Biology, Department of Optometry, and Department of Surgery, The University of Alabama at Birmingham, Birmingham, Alabama, USA; and Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Andrew B West*Center for Neurodegeneration and Experimental Therapeutics, Department of Neurology, Center for Structural Biology, Department of Optometry, and Department of Surgery, The University of Alabama at Birmingham, Birmingham, Alabama, USA; and Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA abwest@uab.edu.
University of Alabama at Birmingham · USEmory University · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Robert S Welner · 1985 to 2026
$165.9M
Mechanisms of LRRK2 Mediated NeurotoxicityR01NS064934 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WEST, ANDREW B · 2010 to 2025
$6.3M
NCI NIH HHS P30 CA013148NCI NIH HHS P30 CA13148NINDS NIH HHS R01 NS064934
6 · The paper itself

Abstract

The leucine-rich repeat kinase (LRRK)-2 protein contains nonoverlapping GTPase and kinase domains, and mutation in either domain can cause Parkinson disease. GTPase proteins are critical upstream modulators of many effector protein kinases. In LRRK2, this paradigm may be reversed, as the kinase domain phosphorylates its own GTPase domain. In this study, we found that the ameba LRRK2 ortholog ROCO4 phosphorylates the GTPase domain [termed Ras-of-complex (ROC) domain in this family] of human LRRK2 on the same residues as the human LRRK2 kinase. Phosphorylation of ROC enhances its rate of GTP hydrolysis [from kcat (catalytic constant) 0.007 to 0.016 min(-1)], without affecting GTP or GDP dissociation kinetics [koff = 0.093 and 0.148 min(-1) for GTP and GDP, respectively). Phosphorylation also promotes the formation of ROC dimers, although GTPase activity appears to be equivalent between purified dimers and monomers. Modeling experiments show that phosphorylation induces conformational changes at the critical p-loop structure. Finally, ROC appears to be one of many GTPases phosphorylated in p-loop residues, as revealed by alignment of LRRK2 autophosphorylation sites with GTPases annotated in the phosphoproteome database. These results provide an example of a novel mechanism for kinase-mediated control of GTPase activity.

Indexed as

Amino Acid SequenceAmoebaGTP PhosphohydrolasesGuanosine TriphosphateHumansLeucine-Rich Repeat Serine-Threonine Protein Kinase-2Molecular Sequence DataPhosphorylationProtein MultimerizationProtein Serine-Threonine KinasesProtein Structure, TertiaryProtozoan ProteinsGTP PhosphohydrolasesGuanosine TriphosphateLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanProtein Serine-Threonine KinasesProtozoan ProteinsG-proteinGTP-hydrolysisParkinson diseasephosphorylationROC

Identifiers

PMID26396237
PMCPMC4684519
OpenAlexW2228972256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.