Evidence map›Paper›PMID 26394672›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2015

Association of Single-Nucleotide Polymorphisms in IL28B, but Not TNF-α, With Severity of Disease Caused by Andes Virus.

Jenniffer Angulo, Karla Pino, Natalia Echeverría-Chagas, Claudia Marco, Constanza Martínez-Valdebenito, Héctor Galeno, Eliecer Villagra, Lilian Vera, Natalia Lagos, Natalia Becerra and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Editorial: Pathogenesis, vaccines, and antivirals against respiratory viruses.Frontiers in cellular and infection microbiology · 2023
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 3 countries.

Jenniffer AnguloLaboratorio de Virología Molecular, Instituto Milenio de Inmunología e Inmunoterapia.
Karla PinoLaboratorio de Virología Molecular, Instituto Milenio de Inmunología e Inmunoterapia.
Natalia Echeverría-ChagasLaboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, Uruguay.
Claudia MarcoLaboratorio de Infectología, Centro de Investigaciones Médicas, Escuela de Medicina, División de Pediatría.
Constanza Martínez-ValdebenitoLaboratorio de Infectología, Centro de Investigaciones Médicas, Escuela de Medicina, División de Pediatría.
Héctor GalenoSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Eliecer VillagraSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Lilian VeraSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Natalia LagosSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Natalia BecerraSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Judith MoraSubdepartamento de Virología Clínica, Departamento Laboratorio Biomédico Nacional y de Referencia.
Andrea BermúdezDepartamento de Asuntos Científicos, Instituto de Salud Pública de Chile, Santiago.
Marcela CárcamoDepartamento de Asuntos Científicos, Instituto de Salud Pública de Chile, Santiago.
Janepsy DíazDepartamento de Asuntos Científicos, Instituto de Salud Pública de Chile, Santiago.
Juan Francisco MiquelDepartamento de Gastroenterología, Facultad de Medicina, Pontificia Universidad Católica de Chile.
Marcela FerrésLaboratorio de Infectología, Centro de Investigaciones Médicas, Escuela de Medicina, División de Pediatría.
Marcelo López-LastraLaboratorio de Virología Molecular, Instituto Milenio de Inmunología e Inmunoterapia.
Instituto de Hematología e Inmunología · CUInstituto de Salud Pública de Chile · CLPontificia Universidad Católica de Chile · CLUniversidad de la República · UY

Funding

Andes virus transmission and pathogenesis in ChileU01AI045452 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI MERTZ, GREGORY JAMES · 2010 to 2014
$2.7M
NIAID NIH HHS U01 AI045452NIAID NIH HHS U01AI045452
6 · The paper itself

Abstract

backgroundAndes virus (ANDV) is the sole etiologic agent of hantavirus cardiopulmonary syndrome (HCPS) in Chile, with a fatality rate of about 35%. Individual host factors affecting ANDV infection outcome are poorly understood. In this case-control genetic association analysis, we explored the link between single-nucleotide polymorphisms (SNPs) rs12979860, rs8099917 and rs1800629 and the clinical outcome of ANDV-induced disease. The SNPs rs12979860 and rs8099917 are known to play a role in the differential expression of the interleukin 28B gene (IL28B), whereas SNP rs1800629 is implicated in the expression of tumor necrosis factor α gene (TNF-α).

methodsA total of 238 samples from confirmed ANDV-infected patients collected between 2006 and 2014, and categorized according to the severity of the disease, were genotyped for SNPs rs12979860, rs8099917, and rs1800629.

resultsAnalysis of IL28B SNPs rs12979860 and rs8099917 revealed a link between homozygosity of the minor alleles (TT and GG, respectively), displaying a mild disease progression, whereas heterozygosity or homozygosity for the major alleles (CT/CC and TG/TT, respectively) in both IL28B SNPs is associated with severe disease. No association with the clinical outcome of HCPS was observed for TNF-α SNP rs1800629 (TNF -308G>A).

conclusionsThe IL28B SNPs rs12979860 and rs8099917, but not TNF-α SNP rs1800629, are associated with the clinical outcome of ANDV-induced disease, suggesting a possible link between IL28B expression and ANDV pathogenesis.

Indexed as

Polymorphism, Single NucleotideSeverity of Illness IndexAdolescentAdultAgedAged, 80 and overCase-Control StudiesChildChild, PreschoolChileFemaleGenetic Association StudiesGenotyping TechniquesHantavirus InfectionsHumansInfantInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsTumor Necrosis Factor-alphaANDVHCPSIL28BSNPTNF-alpha

Identifiers

PMID26394672
PMCPMC4657541
OpenAlexW2244406944

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.