Evidence map›Paper›PMID 26392674›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2015

New results on the single molecule localization problem in two and three dimensions.

Amir Tahmasb, E Sally Ward, Raimund J Ober

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Amir TahmasbDepartment of Biomedical Engineering, Texas A&M University, College Station, TX, USA ; Department of Molecular and Cellular Medicine, Texas A&M Health Science Center, College Station, TX, USA.
E Sally WardDepartment of Molecular and Cellular Medicine, Texas A&M Health Science Center, College Station, TX, USA ; Department of Microbial Pathogenesis and Immunology, Texas A&M Health Science Center, College Station, TX, USA.
Raimund J OberDepartment of Biomedical Engineering, Texas A&M University, College Station, TX, USA ; Department of Molecular and Cellular Medicine, Texas A&M Health Science Center, College Station, TX, USA.

Funding

High accuracy quantum dot tracking in live cellsR01GM085575 · NIGMS · UNIVERSITY OF TEXAS DALLAS · PI OBER, RAIMUND J · 2008 to 2016
$2.5M
NIGMS NIH HHS R01 GM085575
6 · The paper itself

Abstract

Fluorescence microscopy is an optical microscopy technique which has been extensively used to study specifically- labeled subcellular objects, such as proteins, and their functions. The best possible accuracy with which an object of interest can be localized when imaged using a fluorescence microscope is typically calculated using the Cramer- Rao lower bound (CRLB). The calculation of the CRLB, however, so far relied on an analytical expression for the image of the object. This can pose challenges in practice since it is often difficult to find appropriate analytical models for the images of general objects. Even if an appropriate analytical model is available, the lack of knowledge about the precise values of imaging parameters might also impose difficulties in the calculation oxf the CRLB. To address these challenges, we have developed an approach that directly uses an experimentally collected image set to calculate the best possible localization accuracy for a general subcellular object in two and three dimensions. In this approach, we fit smoothly connected piecewise polynomials, known as splines, to the experimentally collected image set to provide a continuous model of the object. This continuous model can then be used for the calculation of the best possible localization accuracy.

Indexed as

Cramér-Rao lower boundFisher information matrixsingle molecule microscopysplines

Identifiers

PMID26392674
PMCPMC4573572

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.