Evidence map›Paper›PMID 26392512›Full record

ArticleAntimicrobial agents and chemotherapy2015

Biochemical Evaluation of the Inhibition Properties of Favipiravir and 2'-C-Methyl-Cytidine Triphosphates against Human and Mouse Norovirus RNA Polymerases.

Zhinan Jin, Kathryn Tucker, Xiaoyan Lin, C Cheng Kao, Ken Shaw, Hua Tan, Julian Symons, Ishani Behera, Vivek K Rajwanshi, Natalia Dyatkina and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

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  20. Norovirus antivirals: Where are we now?Medicinal research reviews · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Zhinan JinAlios BioPharma Inc., South San Francisco, California, USA jdeval@aliosbiopharma.com zjin@aliosbiopharma.com.
Kathryn TuckerAlios BioPharma Inc., South San Francisco, California, USA.
Xiaoyan LinIndiana University, Bloomington, Indiana, USA.
C Cheng KaoIndiana University, Bloomington, Indiana, USA.
Ken ShawAlios BioPharma Inc., South San Francisco, California, USA.
Hua TanAlios BioPharma Inc., South San Francisco, California, USA.
Julian SymonsAlios BioPharma Inc., South San Francisco, California, USA.
Ishani BeheraAlios BioPharma Inc., South San Francisco, California, USA.
Vivek K RajwanshiAlios BioPharma Inc., South San Francisco, California, USA.
Natalia DyatkinaAlios BioPharma Inc., South San Francisco, California, USA.
Guangyi WangAlios BioPharma Inc., South San Francisco, California, USA.
Leo BeigelmanAlios BioPharma Inc., South San Francisco, California, USA.
Jerome DevalAlios BioPharma Inc., South San Francisco, California, USA jdeval@aliosbiopharma.com zjin@aliosbiopharma.com.
Indiana University Bloomington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Norovirus (NoV) is a positive-sense single-stranded RNA virus that causes acute gastroenteritis and is responsible for 200,000 deaths per year worldwide. No effective vaccine or treatment is available. Recent studies have shown that the nucleoside analogs favipiravir (T-705) and 2'-C-methyl-cytidine (2CM-C) inhibit NoV replication in vitro and in animal models, but their precise mechanism of action is unknown. We evaluated the molecular interactions between nucleoside triphosphates and NoV RNA-dependent RNA polymerase (NoVpol), the enzyme responsible for replication and transcription of NoV genomic RNA. We found that T-705 ribonucleoside triphosphate (RTP) and 2CM-C triphosphate (2CM-CTP) equally inhibited human and mouse NoVpol activities at concentrations resulting in 50% of maximum inhibition (IC50s) in the low micromolar range. 2CM-CTP inhibited the viral polymerases by competing directly with natural CTP during primer elongation, whereas T-705 RTP competed mostly with ATP and GTP at the initiation and elongation steps. Incorporation of 2CM-CTP into viral RNA blocked subsequent RNA synthesis, whereas T-705 RTP did not cause immediate chain termination of NoVpol. 2CM-CTP and T-705 RTP displayed low levels of enzyme selectivity, as they were both recognized as substrates by human mitochondrial RNA polymerase. The level of discrimination by the human enzyme was increased with a novel analog of T-705 RTP containing a 2'-C-methyl substitution. Collectively, our data suggest that 2CM-C inhibits replication of NoV by acting as a classic chain terminator, while T-705 may inhibit the virus by multiple mechanisms of action. Understanding the precise mechanism of action of anti-NoV compounds could provide a rational basis for optimizing their inhibition potencies and selectivities.

Indexed as

AmidesAnimalsAntiviral AgentsCell Line, TumorCytidineDNA-Directed RNA PolymerasesEscherichia coliGene Expression Regulation, ViralHepatocytesHost SpecificityHumansKineticsMiceNorovirusPyrazinesRecombinant Proteins2'-C-methylcytidineAmidesAntiviral AgentsCytidineDNA-Directed RNA PolymerasesfavipiravirPyrazinesRecombinant ProteinsRibonucleotidesViral Proteins

Identifiers

PMID26392512
PMCPMC4649231
OpenAlexW2189412781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.