Evidence map›Paper›PMID 26392346›Full record

ArticleMicrobial cell factories2015

Construction and development of an auto-regulatory gene expression system in Bacillus subtilis.

Chengran Guan, Wenjing Cui, Jintao Cheng, Li Zhou, Junling Guo, Xu Hu, Guoping Xiao, Zhemin Zhou

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. mSystems · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. An operator-based expression toolkit forProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Article
  18. The multifunctionality of expression systems inExperimental biology and medicine (Maywood, N.J.) · 2021
    Review
  19. Review
  20. Integrative expression vectors with PBiotechnology reports (Amsterdam, Netherlands) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chengran GuanSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. guanchengran2007@163.com.
Wenjing CuiSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. wjcui@jiangnan.edu.cn.
Jintao ChengSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. 6140203011@vip.jiangnan.edu.cn.
Li ZhouSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. lizhou@jiangnan.edu.cn.
Junling GuoSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. guojunling@jiangnan.edu.cn.
Xu HuSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. joy111747@qq.com.
Guoping XiaoWuxi Biortus Bioscience Co., Ltd, Wuxi, Jiangsu, 214122, China. zxiao@biortus.com.
Zhemin ZhouSchool of Biotechnology, Key Laboratory of Industrial Biotechnology (Ministry of Education), Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, China. zhmzhou@jiangnan.edu.cn.
Jiangnan University · CNBiortus (China) · CN

Funding

Louisiana SURE ProgramR25AA021304 · NIAAA · LSU HEALTH SCIENCES CENTER · PI GREGORY, PAULA ELIZABETH, MOLINA, PATRICIA E. · 2012 to 2016
$436k
NIAAA NIH HHS R25 AA021304
6 · The paper itself

Abstract

backgroundBacillus subtilis is an all-important Gram-positive bacterium of valuable biotechnological utility that has been widely used to over-produce industrially and pharmaceutically relevant proteins. There are a variety of expression systems in terms of types of transcriptional patterns, among which the auto-inducible and growth-phase-dependent promoters are gaining increasing favor due to their inducer-independent feature, allowing for the potential to industrially scale-up. To expand the applicability of the auto-inducible expression system, a novel auto-regulatory expression system coupled with cell density was constructed and developed in B. subtilis using the quorum-sensing related promoter srfA (PsrfA).

resultsThe promoter of the srf operon was used to construct an expression plasmid with the green fluorescent protein (GFP) downstream of PsrfA. The expression displayed a cell-density-dependent pattern in that GFP had a fairly low expression level at the early exponential stage and was highly expressed at the late exponential as well as the stationary stages. Moreover, the recombinant system had a similar expression pattern in wild-type B. subtilis 168, WB600, and WB800, as well as in B. subtilis 168 derivative strain 1681, with the complete deletion of PsrfA, indicating the excellent compatibility of this system. Noticeably, the expression strength of PsrfA was enhanced by optimizing the -10 and -35 core sequence by substituting both sequences with consensus sequences. Importantly, the expression pattern was successfully developed in an auto-regulatory cell-density coupling system by the simple addition of glucose in which GFP could not be strongly expressed until glucose was depleted, resulting in a greater amount of the GFP product and increased cell density. The expression system was eventually tested by the successful over-production of aminopeptidase to a desired level.

conclusionThe auto-regulatory cell density coupling system that is mediated by PsrfA is a novel expression system that has an expression pattern that is split between cell-growth and over-expression, leading to an increase in cell density and elevating the overall expression levels of heterologously expressed proteins. The broad applicability of this system and inducer-free expression property in B. subtilis facilitate the industrial scale-up and medical applications for the over-production of a variety of desired proteins.

Indexed as

Bacillus subtilisGene Expression Regulation, BacterialOperonPromoter Regions, Genetic

Identifiers

PMID26392346
PMCPMC4578258
OpenAlexW2130329039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.