Evidence map›Paper›PMID 26392264›Full record

ArticlePlant physiology2015

Spatially Resolved Plant Metabolomics: Some Potentials and Limitations of Laser-Ablation Electrospray Ionization Mass Spectrometry Metabolite Imaging.

Desalegn W Etalo, Ric C H De Vos, Matthieu H A J Joosten, Robert D Hall

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
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  7. Mass Spectrometry Imaging ofJournal of the American Society for Mass Spectrometry · 2021
    Article
  8. Article
  9. Review
  10. Review
  11. Plant Single-Cell Metabolomics-Challenges and Perspectives.International journal of molecular sciences · 2020
    Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Desalegn W EtaloLaboratory of Plant Physiology (D.W.E., R.D.H.), Plant Research International Bioscience (D.W.E., R.C.H.D.V., R.D.H.), and Laboratory of Phytopathology (M.H.A.J.J.), Wageningen University, 6708 PB, Wageningen, The Netherlands.
Ric C H De VosLaboratory of Plant Physiology (D.W.E., R.D.H.), Plant Research International Bioscience (D.W.E., R.C.H.D.V., R.D.H.), and Laboratory of Phytopathology (M.H.A.J.J.), Wageningen University, 6708 PB, Wageningen, The Netherlands.
Matthieu H A J JoostenLaboratory of Plant Physiology (D.W.E., R.D.H.), Plant Research International Bioscience (D.W.E., R.C.H.D.V., R.D.H.), and Laboratory of Phytopathology (M.H.A.J.J.), Wageningen University, 6708 PB, Wageningen, The Netherlands.
Robert D HallLaboratory of Plant Physiology (D.W.E., R.D.H.), Plant Research International Bioscience (D.W.E., R.C.H.D.V., R.D.H.), and Laboratory of Phytopathology (M.H.A.J.J.), Wageningen University, 6708 PB, Wageningen, The Netherlands robert.hall@wur.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Laser-ablation electrospray ionization (LAESI)-mass spectrometry imaging has been applied to contrasting plant organs to assess its potential as a procedure for performing in vivo metabolomics in plants. In a proof-of-concept experiment, purple/white segmented Phalaenopsis spp. petals were first analyzed using standard liquid chromatography-mass spectrometry analyses of separate extracts made specifically from the purple and white regions. Discriminatory compounds were defined and putatively annotated. LAESI analyses were then performed on living tissues, and these metabolites were then relocalized within the LAESI-generated data sets of similar tissues. Maps were made to illustrate their locations across the petals. Results revealed that, as expected, anthocyanins always mapped to the purple regions. Certain other (nonvisible) polyphenols were observed to colocalize with the anthocyanins, whereas others were found specifically within the white tissues. In a contrasting example, control and Cladosporium fulvum-infected tomato (Solanum lycopersicum) leaves were subjected to the same procedures, and it could be observed that the alkaloid tomatine has clear heterogeneous distribution across the tomato leaf lamina. Furthermore, LAESI analyses revealed perturbations in alkaloid content following pathogen infection. These results show the clear potential of LAESI-based imaging approaches as a convenient and rapid way to perform metabolomics analyses on living tissues. However, a range of limitations and factors have also been identified that must be taken into consideration when interpreting LAESI-derived data. Such aspects deserve further evaluation before this approach can be applied in a routine manner.

Indexed as

LasersAnthocyaninsCladosporiumFlavonoidsFlowersGene Expression Regulation, PlantMolecular StructureOrchidaceaePlant DiseasesSolanum lycopersicumSpectrometry, Mass, Electrospray IonizationAnthocyaninsFlavonoids

Identifiers

PMID26392264
PMCPMC4634093
OpenAlexW1903244149

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.