Evidence map›Paper›PMID 26392261›Full record

ArticlePlant physiology2015

JACALIN-LECTIN LIKE1 Regulates the Nuclear Accumulation of GLYCINE-RICH RNA-BINDING PROTEIN7, Influencing the RNA Processing of FLOWERING LOCUS C Antisense Transcripts and Flowering Time in Arabidopsis.

Jun Xiao, Chunhua Li, Shujuan Xu, Lijing Xing, Yunyuan Xu, Kang Chong

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jun XiaoKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.).
Chunhua LiKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.).
Shujuan XuKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.).ORCID http://orcid.org/0000-0003-1687-9833
Lijing XingKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.).
Yunyuan XuKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.).
Kang ChongKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (J.X., C.L., S.X., L.X., Y.X., K.C.);National Center for Plant Gene Research, Beijing 100093, China (K.C.); andUniversity of the Chinese Academy of Sciences, Beijing 100049, China (J.X., C.L., S.X.) chongk@ibcas.ac.cn.
Chinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CNInstitute of Botany · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lectins selectively recognize sugars or glycans for defense in living cells, but less is known about their roles in the development process and the functional network with other factors. Here, we show that Arabidopsis (Arabidopsis thaliana) JACALIN-LECTIN LIKE1 (AtJAC1) functions in flowering time control. Loss of function of AtJAC1 leads to precocious flowering, whereas overexpression of AtJAC1 causes delayed flowering. AtJAC1 influences flowering through regulation of the key flowering repressor gene FLOWERING LOCUS C (FLC). Genetic analysis revealed that AtJAC1's function is mostly dependent on GLYCINE-RICH RNA-BINDING PROTEIN7 (GRP7), an upstream regulator of FLC. Biochemical and cell biological data indicated that AtJAC1 interacted physically with GRP7 specifically in the cytoplasm. AtJAC1 influences the nucleocytoplasmic distribution of GRP7, with predominant nuclear localization of GRP7 when AtJAC1 function is lost but retention of GRP7 in the cytoplasm when AtJAC1 is overexpressed. A temporal inducible assay suggested that AtJAC1's regulation of flowering could be compromised by the nuclear accumulation of GRP7. In addition, GRP7 binds to the antisense precursor messenger RNA of FLC through a conserved RNA motif. Loss of GRP7 function leads to the elevation of total FLC antisense transcripts and reduced proximal-distal polyadenylation ratio, as well as histone methylation changes in the FLC gene body region and increased total functional sense FLC transcript. Attenuating the direct binding of GRP7 with competing artificial RNAs leads to changes of FLC antisense precursor messenger RNA processing and flowering transition. Taken together, our study indicates that AtJAC1 coordinates with GRP7 in shaping plant development through the regulation of RNA processing in Arabidopsis.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsAuxilinsChromatinFlowersGene ExpressionGlycineHistonesMADS Domain ProteinsMethylationMutagenesis, InsertionalPlant LectinsPolyadenylationRNA, AntisenseRNA-Binding ProteinsArabidopsis ProteinsAt5g10140 protein, ArabidopsisAuxilinsChromatinF9E10.5 protein, ArabidopsisGlycineGRP7 protein, ArabidopsisHistonesjacalinMADS Domain ProteinsPlant LectinsRNA, AntisenseRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID26392261
PMCPMC4634062
OpenAlexW1922655698

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.